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BaseInfo

ncRNA ID novel_zma_miR8992
Species Zea mays
Class miRNA
Genome position Chr3:225265112-225265257 [-]
Reference genome RefGen_v4
Source SRR1997865
Length 24
Mature sequence(if miRNA) 123 - CUGGGCUAGGACACGCGACGACAA - 146
Stem-loop(if miRNA) --       A         A        C           C                              CG
  CUGGGCU GGACACGCG CGACAAUU ACUCGUCGGUC AGGGACCCCCCGGGGUCGAAACGCCGACAG  C
  ||||||| ||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||
  GACCCGA CCUGUGCGC GCUGUUAA UGAGCAGCCAG UCCCUGGGGGGCCCCAGUUUUGCGGCUGUC  C
UA       C         C        A           A                              AA
Stem-loop sequence CUGGGCUAGGACACGCGACGACAAUUCACUCGUCGGUCCAGGGACCCCCCGGGGUCGAAACGCCGACAGCGCCAACUGUCGGCGUUUUGACCCCGGGGGGUCCCUAGACCGACGAGUAAAUUGUCGCCGCGUGUCCCAGCCCAGAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020546720.1
ncRNA:24   AACAGCAGCGCACAGGAUCGGGUC   1
  ||||||*|||||||||*|||||||
targets:6512   UUGUCGCCGCGUGUCCCAGCCCAG   6535

2.5 PREDICTED: Zea mays dirigent protein 1 (LOC100285699), mRNA NA coding protein psRNATarget