ncRNA ID | novel_zma_miR8992 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr3:225265112-225265257 [-] |
Reference genome | RefGen_v4 |
Source | SRR1997865 |
Length | 24 |
Mature sequence(if miRNA) | 123 - CUGGGCUAGGACACGCGACGACAA - 146 |
Stem-loop(if miRNA) |
--       A         A        C           C                              CG   CUGGGCU GGACACGCG CGACAAUU ACUCGUCGGUC AGGGACCCCCCGGGGUCGAAACGCCGACAG  C   ||||||| ||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||   GACCCGA CCUGUGCGC GCUGUUAA UGAGCAGCCAG UCCCUGGGGGGCCCCAGUUUUGCGGCUGUC  C UA       C         C        A           A                              AA |
Stem-loop sequence | CUGGGCUAGGACACGCGACGACAAUUCACUCGUCGGUCCAGGGACCCCCCGGGGUCGAAACGCCGACAGCGCCAACUGUCGGCGUUUUGACCCCGGGGGGUCCCUAGACCGACGAGUAAAUUGUCGCCGCGUGUCCCAGCCCAGAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020546720.1 |
|
2.5 | PREDICTED: Zea mays dirigent protein 1 (LOC100285699), mRNA | NA | coding protein | psRNATarget |