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BaseInfo

ncRNA ID novel_zma_miR8989
Species Zea mays
Class miRNA
Genome position Chr5:3103214-3103307 [+]
Reference genome RefGen_v4
Source SRR4237222
Length 24
Mature sequence(if miRNA) 1 - AACUGUGAGAGCACCUAGAGGGGG - 24
Stem-loop(if miRNA) --       AG         -A   ---G -   GA      GAUCCU  A
  AACUGUG  AGCACCUAG  GGG    G GGU  AUAGGU      GU A
  |||||||  |||||||||  |||    | |||  ||||||      ||
  UUGACAC  UUGUGGAUU  UUC    C CCG  UAUUCA      CA A
AG       GA         AG   AAAA A   -A      --AAUU  A
Stem-loop sequence AACUGUGAGAGCACCUAGAGGGGGGGUGAAUAGGUGAUCCUGUAAAAACUUAAACUUAUAGCCACAAAACUUGAUUAGGUGUUAGCACAGUUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008680239.2
ncRNA:24   GG-GGGAGAUCCACGAGAGUGUCAA   1
  ||-||=|||||||||||||*||||*
targets:2694   CCGCCUUCUAGGUGCUCUCUCAGUA   2718

2.5 PREDICTED: Zea mays formin-like protein 6 (LOC103653301), transcript variant X1, mRNA NA coding protein psRNATarget