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BaseInfo

ncRNA ID	novel_zma_miR8985
Species	Zea mays
Class	miRNA
Genome position	Chr5:147481292-147481378 [-]
Reference genome	RefGen_v4
Source	SRR4237222
Length	24
Mature sequence(if miRNA)	1 - CUUUGCCGAGUGUUGUCUGGCACU - 24
Stem-loop(if miRNA)	--     CCC G               --C  UU  -----UC    A   UGUCA   G GACACUCGGCAAAGA   GC  UC       CGUC C   |||||   | |||||||||||||||   ||  ||       ||||   ACGGU   U UUGUGAGCCGUUUCU   CG  AG       GCGG C UC     --C G               UUU  UC  CAAUGCC    C
Stem-loop sequence	UGUCACCCGGGACACUCGGCAAAGACGCUUUCUCCGUCACCCGGCGCCGUAACGACUGCUUUUCUUUGCCGAGUGUUGUCUGGCACU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ238769.1	ncRNA:24   UCAC--GGUCUGUUGUGAGCCGUUUC   1   ||||--||**=||||||||||||||| targets:30   AGUGUCCCUUGCAACACUCGGCAAAG   55 Target Full Sequence	3.0	Sequence 4764 from Patent EP2985353	NA	coding protein	psRNATarget
JB167100.1	ncRNA:24   UCAC--GGUCUGUUGUGAGCCGUUUC   1   ||||--||**=||||||||||||||| targets:30   AGUGUCCCUUGCAACACUCGGCAAAG   55 Target Full Sequence	3.0	Sequence 4764 from Patent EP2559767	NA	coding protein	psRNATarget
HI406639.1	ncRNA:24   UCAC--GGUCUGUUGUGAGCCGUUUC   1   ||||--||**=||||||||||||||| targets:30   AGUGUCCCUUGCAACACUCGGCAAAG   55 Target Full Sequence	3.0	Sequence 4764 from Patent EP2074227	NA	coding protein	psRNATarget
XM_008654495.2	ncRNA:24   UCACGGUCUGUUGUGAGCCGUUUC   1   ******|||||||||||||||||| targets:49   CAAAGAAGACAACACUCGGCAAAG   72 Target Full Sequence	1.0	PREDICTED: Zea mays probable GMP synthase [glutamine-hydrolyzing] (LOC103632764), mRNA	NA	coding protein	psRNATarget
NM_001152461.1	ncRNA:24   UCACGGUCUGUUGUGAGCCGUUUC   1   ||||=||*|*|||||||||||||* targets:896   AGUGUCAAAAAACACUCGGCAAAU   919 Target Full Sequence	3.0	Zea mays uncharacterized LOC100279456 (IDP836), mRNA	NA	coding protein	psRNATarget
BT054268.1	ncRNA:24   UCACGGUCUGUUGUGAGCCGUUUC   1   ||||=||*|*|||||||||||||* targets:896   AGUGUCAAAAAACACUCGGCAAAU   919 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFb0206G23 mRNA, complete cds	NA	coding protein	psRNATarget