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BaseInfo

ncRNA ID novel_zma_miR8983
Species Zea mays
Class miRNA
Genome position Chr5:158773940-158773992 [-]
Reference genome RefGen_v4
Source SRR4237222
Length 24
Mature sequence(if miRNA) 1 - AGAGUAGAAUAGAGCGGAGCUGCU - 24
Stem-loop(if miRNA) --   AG            UUG   GG
  CAG  CCGCUCUAUUUU   UUU  U
  |||  ||||||||||||   |||
  GUC  GGCGAGAUAAGA   AGA  U
UC   GA            -UG   AU
Stem-loop sequence CAGAGCCGCUCUAUUUUUUGUUUGGUUUAAGAGUAGAAUAGAGCGGAGCUGCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU945197.1
ncRNA:24   UCGUCGAGGCGAGAUAAGAUGAGA   1
  |||=||||||||||||||||||||
targets:100   AGCGGCUCCGCUCUAUUCUACUCU   123

0.0 Zea mays clone 244184 mRNA sequence NA coding protein psRNATarget
BT084215.2
ncRNA:24   UCGUCGAGGCGAGAUAAGAUGAGA   1
  |||=*||||*||||||||||||||
targets:1032   AGCGACUCCACUCUAUUCUACUCU   1055

1.0 Zea mays full-length cDNA clone ZM_BFb0090B20 mRNA, complete cds NA coding protein psRNATarget