ncRNA ID | novel_zma_miR8978 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr10:83695220-83695372 [+] |
Reference genome | RefGen_v4 |
Source | SRR4237222;SRR4237223;SRR4237227 |
Length | 24 |
Mature sequence(if miRNA) | 1 - ACACUCGGCGAAGAAACUCUUUGC - 24 |
Stem-loop(if miRNA) |
--              AA                U     U              A    U              UU   ACACUCGGCGAAGA  CUCUUUGCCGAGUGUU UAUUU UGACACUCGGCAAA AGUU CUUUGCCGAGUGUC  U   ||||||||||||||  |||||||||||||||| ||||| |||||||||||||| |||| ||||||||||||||  U   UGUGAGCCGUUUCU  GAGAAACGGCUCACAA AUAAA ACUGUGAGCCGUUU UCGG GAAACGGCUCACAG  U UU              -C                C     C              C    -              UU |
Stem-loop sequence | ACACUCGGCGAAGAAACUCUUUGCCGAGUGUUUUAUUUUUGACACUCGGCAAAAAGUUUCUUUGCCGAGUGUCUUUUUUUGACACUCGGCAAAGGGCUCUUUGCCGAGUGUCACAAAUACAACACUCGGCAAAGAGCUCUUUGCCGAGUGUUU |