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BaseInfo

ncRNA ID	novel_zma_miR8970
Species	Zea mays
Class	miRNA
Genome position	Chr3:229310591-229310716 [-]
Reference genome	RefGen_v4
Source	SRR1997865
Length	24
Mature sequence(if miRNA)	103 - GUGGCAAGUCCCAGGGAGUCGGCG - 126
Stem-loop(if miRNA)	--                A                  U              U  CG   GGG   GUGGCAAGUCCCAGGG GUCGGCGCCAUAGAUCUU GCGCCGACCCCCCU GA  GUG   U   |||||||||||||||| |||||||||||||||||| |||||||||||||| ||  |||   CACCGUUUAGGGUCCC CGGCCGCGGUAUCUAGAA CGCGGCUGGGGGGA CU  CGC   A CU                C                  C              U  AU   GGC
Stem-loop sequence	GUGGCAAGUCCCAGGGAGUCGGCGCCAUAGAUCUUUGCGCCGACCCCCCUUGACGGUGGGGUACGGCGCUAUCUAGGGGGGUCGGCGCCAAGAUCUAUGGCGCCGGCCCCCUGGGAUUUGCCACUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB167647.1	ncRNA:24   GCGGCUGAGGGACCCUGAACGGUG   1   |||||||*||||*||||||||||| targets:40   CGCCGACCCCCUAGGACUUGCCAC   63 Target Full Sequence	2.5	Sequence 5311 from Patent EP2559767	NA	coding protein	psRNATarget
LQ239316.1	ncRNA:24   GCGGCUGAGGGACCCUGAACGGUG   1   |||||||*||||*||||||||||| targets:40   CGCCGACCCCCUAGGACUUGCCAC   63 Target Full Sequence	2.5	Sequence 5311 from Patent EP2985353	NA	coding protein	psRNATarget
HI407186.1	ncRNA:24   GCGGCUGAGGGACCCUGAACGGUG   1   |||||||*||||*||||||||||| targets:40   CGCCGACCCCCUAGGACUUGCCAC   63 Target Full Sequence	2.5	Sequence 5311 from Patent EP2074227	NA	coding protein	psRNATarget
EU959730.1	ncRNA:24   GCGGCUGAGGGACCCUGAACGGUG   1   =||=|||*|=|||||||||||||| targets:1540   UGCUGACCCUCUGGGACUUGCCAC   1563 Target Full Sequence	2.0	Zea mays clone 219696 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001149941.1	ncRNA:24   GCGGCUGAGGGACCCUGAACGGUG   1   =||=|||*|=|||||||||||||| targets:1540   UGCUGACCCUCUGGGACUUGCCAC   1563 Target Full Sequence	2.0	Zea mays Core-2/I-branching beta-16-N-acetylglucosaminyltransferase family protein (LOC100276060), mRNA	NA	coding protein	psRNATarget