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BaseInfo

ncRNA ID	novel_zma_miR8963
Species	Zea mays
Class	miRNA
Genome position	Chr10:78794748-78794823 [+]
Reference genome	RefGen_v4
Source	SRR4237222
Length	25
Mature sequence(if miRNA)	52 - CUUUGCCGAGUGUUGUGACCCUGGC - 76
Stem-loop(if miRNA)	--                        UGGAAC   UGG   CAGGGUCAUAGCACUCGGCAGAGA      ACC   G   ||||||||||||||||||||||||      |||   GUCCCAGUGUUGUGAGCCGUUUCU      UGG   C CG                        UUGAAA   UCA
Stem-loop sequence	CAGGGUCAUAGCACUCGGCAGAGAUGGAACACCUGGGCACUGGUAAAGUUUCUUUGCCGAGUGUUGUGACCCUGGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ238769.1	ncRNA:25   CGGUCCCAGUGUUGUGAGCCGUUUC   1   ||||**|*||=*||||||||||||| targets:182   GCCAUAGACAUUACACUCGGCAAAG   206 Target Full Sequence	3.0	Sequence 4764 from Patent EP2985353	NA	coding protein	psRNATarget
HI406639.1	ncRNA:25   CGGUCCCAGUGUUGUGAGCCGUUUC   1   ||||**|*||=*||||||||||||| targets:182   GCCAUAGACAUUACACUCGGCAAAG   206 Target Full Sequence	3.0	Sequence 4764 from Patent EP2074227	NA	coding protein	psRNATarget
JB167100.1	ncRNA:25   CGGUCCCAGUGUUGUGAGCCGUUUC   1   ||||**|*||=*||||||||||||| targets:182   GCCAUAGACAUUACACUCGGCAAAG   206 Target Full Sequence	3.0	Sequence 4764 from Patent EP2559767	NA	coding protein	psRNATarget
JB167423.1	ncRNA:25   CGGUCCCAGUGUUGUGAGCCGUUUC   1   *===*||*||=|||||||||||||| targets:132   UUUGUGGCCAUAACACUCGGCAAAG   156 Target Full Sequence	2.0	Sequence 5087 from Patent EP2559767	NA	coding protein	psRNATarget
LQ239092.1	ncRNA:25   CGGUCCCAGUGUUGUGAGCCGUUUC   1   *===*||*||=|||||||||||||| targets:132   UUUGUGGCCAUAACACUCGGCAAAG   156 Target Full Sequence	2.0	Sequence 5087 from Patent EP2985353	NA	coding protein	psRNATarget
HI406962.1	ncRNA:25   CGGUCCCAGUGUUGUGAGCCGUUUC   1   *===*||*||=|||||||||||||| targets:132   UUUGUGGCCAUAACACUCGGCAAAG   156 Target Full Sequence	2.0	Sequence 5087 from Patent EP2074227	NA	coding protein	psRNATarget
JB167204.1	ncRNA:19   CAGUGUUGUGAGCCGUUUC   1   ||||=|=|||||||||||| targets:1   GUCAUAGCACUCGGCAAAG   19 Target Full Sequence	2.5	Sequence 4868 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238873.1	ncRNA:19   CAGUGUUGUGAGCCGUUUC   1   ||||=|=|||||||||||| targets:1   GUCAUAGCACUCGGCAAAG   19 Target Full Sequence	2.5	Sequence 4868 from Patent EP2985353	NA	coding protein	psRNATarget
HI406743.1	ncRNA:19   CAGUGUUGUGAGCCGUUUC   1   ||||=|=|||||||||||| targets:1   GUCAUAGCACUCGGCAAAG   19 Target Full Sequence	2.5	Sequence 4868 from Patent EP2074227	NA	coding protein	psRNATarget
LQ239157.1	ncRNA:25   CGGUCCCAGUGUUGUGAGCCGUUUC   1   ||||**|*||=*||||||||||||| targets:4   GCCACAGACAUUACACUCGGCAAAG   28 Target Full Sequence	3.0	Sequence 5152 from Patent EP2985353	NA	coding protein	psRNATarget
HI407027.1	ncRNA:25   CGGUCCCAGUGUUGUGAGCCGUUUC   1   ||||**|*||=*||||||||||||| targets:4   GCCACAGACAUUACACUCGGCAAAG   28 Target Full Sequence	3.0	Sequence 5152 from Patent EP2074227	NA	coding protein	psRNATarget
JB167488.1	ncRNA:25   CGGUCCCAGUGUUGUGAGCCGUUUC   1   ||||**|*||=*||||||||||||| targets:4   GCCACAGACAUUACACUCGGCAAAG   28 Target Full Sequence	3.0	Sequence 5152 from Patent EP2559767	NA	coding protein	psRNATarget