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BaseInfo

ncRNA ID	novel_zma_miR8954
Species	Zea mays
Class	miRNA
Genome position	Chr4:67396701-67396769 [-]
Reference genome	RefGen_v4
Source	SRR4237222
Length	24
Mature sequence(if miRNA)	46 - AUGCCAGCCUGGGCACCGGACACU - 69
Stem-loop(if miRNA)	--AU        --  -       AC          G     GCCAGCCU  GG GCACCGG  ACUGUCUGGU C     ||||||||  || |||||||  ||||||||||     UGGUCGGA  CC CGUGGCU  UGAUAGGCCA A AACG        UG  G       --          C
Stem-loop sequence	AUGCCAGCCUGGGCACCGGACACUGUCUGGUGCACACCGGAUAGUUCGGUGCGCCGUAGGCUGGUGCAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_001175661.1	ncRNA:24   UCACAGGCCACG-GGUCCGACCGUA   1   ||||||||||||-|||||||||||| targets:991   AGUGUCCGGUGCGCCAGGCUGGCAU   1015 Target Full Sequence	3.0	Zea mays uncharacterized LOC100382977 (LOC100382977), mRNA	NA	coding protein	psRNATarget
BT065862.1	ncRNA:24   UCACAGGCCACG-GGUCCGACCGUA   1   ||||||||||||-|||||||||||| targets:991   AGUGUCCGGUGCGCCAGGCUGGCAU   1015 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFc0155J05 mRNA, complete cds	NA	coding protein	psRNATarget
LQ238413.1	ncRNA:24   UCACAGGCCACGGGUCCGACCGUA   1   ||||||||||||||||||||||** targets:31   AGUGUCCGGUGCCCAGGCUGGCCC   54 Target Full Sequence	2.5	Sequence 4408 from Patent EP2985353	NA	coding protein	psRNATarget
JB166744.1	ncRNA:24   UCACAGGCCACGGGUCCGACCGUA   1   ||||||||||||||||||||||** targets:31   AGUGUCCGGUGCCCAGGCUGGCCC   54 Target Full Sequence	2.5	Sequence 4408 from Patent EP2559767	NA	coding protein	psRNATarget
HI406283.1	ncRNA:24   UCACAGGCCACGGGUCCGACCGUA   1   ||||||||||||||||||||||** targets:31   AGUGUCCGGUGCCCAGGCUGGCCC   54 Target Full Sequence	2.5	Sequence 4408 from Patent EP2074227	NA	coding protein	psRNATarget
XM_020537648.1	ncRNA:24   UCACAGGCCACGGGUCCGACCGUA   1   |*|||||||||||=|||||||||| targets:1677   AAUGUCCGGUGCCUAGGCUGGCAU   1700 Target Full Sequence	1.5	PREDICTED: Zea mays translation initiation factor IF-2-like (LOC109939463), mRNA	NA	coding protein	psRNATarget