Search result

BaseInfo

ncRNA ID novel_zma_miR8950
Species Zea mays
Class miRNA
Genome position Chr4:86430826-86430899 [-]
Reference genome RefGen_v4
Source SRR4237222;SRR4237224;SRR4237225;SRR4237227
Length 24
Mature sequence(if miRNA) 51 - AGCCGUCGGACAUAGUCUUAUGUC - 74
Stem-loop(if miRNA) --   CG           C              CG A
  AGC  UCGGACAUAGU UUAUGUCCGACGGU  U C
  |||  ||||||||||| ||||||||||||||  |
  UCG  AGCUUGUAUCA AAUACAGGCUGCCG  G A
CU   AU           C              AU G
Stem-loop sequence AGCCGUCGGACAUAGUCUUAUGUCCGACGGUCGUACAGGUAGCCGUCGGACAUAACACUAUGUUCGAUAGCUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB166317.1
ncRNA:24   CUGUAUUCUGAUACAGGCUGCCGA   1
  ||*|||||==|||||||||||||*
targets:10   GAGAUAAGGUUAUGUCCGACGGCC   33

3.0 Sequence 3981 from Patent EP2559767 NA coding protein psRNATarget
LQ237986.1
ncRNA:24   CUGUAUUCUGAUACAGGCUGCCGA   1
  ||*|||||==|||||||||||||*
targets:10   GAGAUAAGGUUAUGUCCGACGGCC   33

3.0 Sequence 3981 from Patent EP2985353 NA coding protein psRNATarget
HI405856.1
ncRNA:24   CUGUAUUCUGAUACAGGCUGCCGA   1
  ||*|||||==|||||||||||||*
targets:10   GAGAUAAGGUUAUGUCCGACGGCC   33

3.0 Sequence 3981 from Patent EP2074227 NA coding protein psRNATarget