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BaseInfo

ncRNA ID novel_zma_miR8948
Species Zea mays
Class miRNA
Genome position Chr4:101254124-101254212 [-]
Reference genome RefGen_v4
Source SRR4237222
Length 23
Mature sequence(if miRNA) 67 - UAAUAUAAGAACGUCGGUACCCA - 89
Stem-loop(if miRNA) --    A         C      C          AUUAACCCAC
  UAAU UAAGAACGU GGUACC AUGUUCUUAA          G
  |||| ||||||||| |||||| ||||||||||          A
  AUUA AUUCUUGCA CCAUGG UGCAAGAAUU          A
CA    A         C      C          AACUCAAUAC
Stem-loop sequence UAAUAUAAGAACGUCGGUACCCAUGUUCUUAAAUUAACCCACGAACAUAACUCAAUUAAGAACGUCGGUACCCACGUUCUUAAAUUAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ235546.1
ncRNA:23   ACCCAUGGCUGCAAGAAUAUAAU   1
  ||||||||*||||||||||||||
targets:60   UGGGUACCCACGUUCUUAUAUUA   82

1.0 Sequence 1541 from Patent EP2985353 NA coding protein psRNATarget
HI403416.1
ncRNA:23   ACCCAUGGCUGCAAGAAUAUAAU   1
  ||||||||*||||||||||||||
targets:60   UGGGUACCCACGUUCUUAUAUUA   82

1.0 Sequence 1541 from Patent EP2074227 NA coding protein psRNATarget
JB163877.1
ncRNA:23   ACCCAUGGCUGCAAGAAUAUAAU   1
  ||||||||*||||||||||||||
targets:60   UGGGUACCCACGUUCUUAUAUUA   82

1.0 Sequence 1541 from Patent EP2559767 NA coding protein psRNATarget