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BaseInfo

ncRNA ID	novel_zma_miR8947
Species	Zea mays
Class	miRNA
Genome position	Chr4:114288410-114288499 [-]
Reference genome	RefGen_v4
Source	SRR4237222
Length	24
Mature sequence(if miRNA)	67 - GUACCUCGGCGCCGUAGAUCUUGG - 90
Stem-loop(if miRNA)	--           C                   C     UCCAUC   GUACCUCGGCG CGUAGAUCUUGGCGCCGAG UAGGC      A   ||||||||||| ||||||||||||||||||| |||||   CAUGGAGCCGC GCAUCUAGAACCGUGGCUC AUCCG      A UG           A                   C     CGCUCU
Stem-loop sequence	GUACCUCGGCGCCGUAGAUCUUGGCGCCGAGCUAGGCUCCAUCAAUCUCGCGCCUACCUCGGUGCCAAGAUCUACGACGCCGAGGUACGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008664820.2	ncRNA:24   GGUUCUAGAUGCCGCGGCUCCAUG   1   ||||||||||=||||||||||||| targets:23   CCAAGAUCUAUGGCGCCGAGGUAC   46 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC103641469 (LOC103641469), mRNA	NA	coding protein	psRNATarget
XM_020544295.1	ncRNA:24   GGUUCUAGAUGCCGCGGCUCCAUG   1   ||||||||||=||||||||||||| targets:68   CCAAGAUCUAUGGCGCCGAGGUAC   91 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC103644543 (LOC103644543), mRNA	NA	coding protein	psRNATarget
XM_020548134.1	ncRNA:24   GGUUCUAGAUGCCGCGGCUCCAUG   1   ||||||||||=||||||||||||| targets:45   CCAAGAUCUAUGGCGCCGAGGUAC   68 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC109943956 (LOC109943956), mRNA	NA	coding protein	psRNATarget
XM_020545943.1	ncRNA:24   GGUUCUAGAUGCCGCGGCUCCAUG   1   ||||||||||=||||||||||||| targets:225   CCAAGAUCUAUGGCGCCGAGGUAC   248 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC109943115 (LOC109943115), mRNA	NA	coding protein	psRNATarget
XM_008666282.2	ncRNA:24   GGUUCUAGAUGCCGCGGCUCCAUG   1   ||||||||||=||||||||||||| targets:225   CCAAGAUCUAUGGCGCCGAGGUAC   248 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC103643129 (LOC103643129), mRNA	NA	coding protein	psRNATarget
XM_020545942.1	ncRNA:24   GGUUCUAGAUGCCGCGGCUCCAUG   1   ||||||||||=||||||||||||| targets:225   CCAAGAUCUAUGGCGCCGAGGUAC   248 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC109943114 (LOC109943114), mRNA	NA	coding protein	psRNATarget
XM_020541347.1	ncRNA:24   GGUUCUAGAUGCCGCGGCUCCAUG   1   ||||||||||=||||||||||||| targets:229   CCAAGAUCUAUGGCGCCGAGGUAC   252 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC109940949 (LOC109940949), mRNA	NA	coding protein	psRNATarget
XM_008652363.2	ncRNA:24   GGUUCUAGAUGCCGCGGCUCCAUG   1   ||||||||||=||||||||||||| targets:229   CCAAGAUCUAUGGCGCCGAGGUAC   252 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC103631452 (LOC103631452), mRNA	NA	coding protein	psRNATarget
XM_020537732.1	ncRNA:24   GGUUCUAGAUGCCGCGGCUCCAUG   1   ||||||||||=||||||||||||| targets:294   CCAAGAUCUAUGGCGCCGAGGUAC   317 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC109939552 (LOC109939552), mRNA	NA	coding protein	psRNATarget
XM_008654703.2	ncRNA:24   GGUUCUAGAUGCCGCGGCUCCAUG   1   ||||||||||=||||||||||||| targets:1001   CCAAGAUCUAUGGCGCCGAGGUAC   1024 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC103633011 (LOC103633011), mRNA	NA	coding protein	psRNATarget
XM_008666873.2	ncRNA:24   GGU---UCUAGAUGCCGCGGCUCCAUG   1   ||=---=|*||||||||||||||||=| targets:764   CCGCGCGGUUCUACGGCGCCGAGGUGC   790 Target Full Sequence	2.5	PREDICTED: Zea mays protein kinase PINOID (LOC103643693), mRNA	NA	coding protein	psRNATarget