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BaseInfo

ncRNA ID	novel_zma_miR8938
Species	Zea mays
Class	miRNA
Genome position	Chr4:206727827-206727904 [-]
Reference genome	RefGen_v4
Source	SRR4237222
Length	24
Mature sequence(if miRNA)	55 - AAACACUCGACAAAGAAACUCUUU - 78
Stem-loop(if miRNA)	--         A A     A               CAAA   AAACACUCG C AAGAA CUCUUUGCCGAGUGU    A   ||||||||| | ||||| |||||||||||||||   UUUGUGAGU G UUCUU GAGAAACGGCUCACA    G CU         C C     C               AAAU
Stem-loop sequence	AAACACUCGACAAAGAAACUCUUUGCCGAGUGUCAAAAGUAAAACACUCGGCAAAGAGCUUCUUCGCUGAGUGUUUUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_001165647.1	ncRNA:24   UUUCUCAAAGAAACAGCUCACAAA   1   |||*|||||||||||||||||||| targets:80   AAAAAGUUUCUUUGUCGAGUGUUU   103 Target Full Sequence	0.0	Zea mays uncharacterized LOC100304195 (LOC100304195), mRNA	NA	coding protein	psRNATarget
BT055423.1	ncRNA:24   UUUCUCAAAGAAACAGCUCACAAA   1   |||*|||||||||||||||||||| targets:80   AAAAAGUUUCUUUGUCGAGUGUUU   103 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0179M04 mRNA, complete cds	NA	coding protein	psRNATarget
BT054268.1	ncRNA:24   UUUCUCAAAGAAACAGCUCACAAA   1   |||*|||||||||||||||||||| targets:2099   AAAAAGUUUCUUUGUCGAGUGUUU   2122 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0206G23 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001152461.1	ncRNA:24   UUUCUCAAAGAAACAGCUCACAAA   1   |||*|||||||||||||||||||| targets:2099   AAAAAGUUUCUUUGUCGAGUGUUU   2122 Target Full Sequence	0.0	Zea mays uncharacterized LOC100279456 (IDP836), mRNA	NA	coding protein	psRNATarget