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BaseInfo

ncRNA ID novel_zma_miR8924
Species Zea mays
Class miRNA
Genome position Chr4:144601769-144601834 [-]
Reference genome RefGen_v4
Source SRR4237221;SRR4237222;SRR4237223
Length 24
Mature sequence(if miRNA) 43 - ACCGAACCCGAACCGAACCCGAAU - 66
Stem-loop(if miRNA) ---A          ACC                 A
    CCGAACCCGA   GAACCCGAAUAGACCGA U
    ||||||||||   |||||||||||||||||
    GGCUUGGGCU   UUUGGGCUUAUCUGGUU U
CUUG          ---                 A
Stem-loop sequence ACCGAACCCGAACCGAACCCGAAUAGACCGAAUUAUUGGUCUAUUCGGGUUUUCGGGUUCGGGUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020544549.1
ncRNA:24   UAAGCCCAAGCCAAGCCCAAGCCA   1
  =|||||||||||||||||||||||
targets:921   GUUCGGGUUCGGUUCGGGUUCGGU   944

0.0 PREDICTED: Zea mays uncharacterized LOC109942488 (LOC109942488), mRNA NA coding protein psRNATarget
XM_020543912.1
ncRNA:24   UAAGCCCAAGCCAAGCCCAAGCCA   1
  =||||||||||||||||*||||||
targets:1697   GUUCGGGUUCGGUUCGGAUUCGGU   1720

1.5 PREDICTED: Zea mays coronatine-insensitive protein homolog 2-like (LOC103638597), mRNA NA coding protein psRNATarget
NM_001155605.1
ncRNA:24   UAAGCCCAAGCCAAGCCCAAGCCA   1
  =||--||||||||||||*|||||*
targets:20   GUU--GGUUCGGUUCGGUUUCGGC   41

2.5 Zea mays phosphatase DCR2 (LOC100282698), mRNA NA coding protein psRNATarget
EU961980.1
ncRNA:24   UAAGCCCAAGCCAAGCCCAAGCCA   1
  =||--||||||||||||*|||||*
targets:20   GUU--GGUUCGGUUCGGUUUCGGC   41

2.5 Zea mays clone 239444 phosphatase DCR2 mRNA, complete cds NA coding protein psRNATarget