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BaseInfo

ncRNA ID novel_zma_miR8918
Species Zea mays
Class miRNA
Genome position Chr4:207674925-207675047 [-]
Reference genome RefGen_v4
Source SRR4237221;SRR4237223;SRR4237226
Length 24
Mature sequence(if miRNA) 1 - AAUCCUGGACAACCGAACAAGCCC - 24
Stem-loop(if miRNA) --   -         C     A  G      U    C      UGU   ----    GUU   CU
  GCU GUUCGGUUG UCCGG AU GAGGCC GGAA UAUUCC   CUG    GAUU   UAC  A
  ||| ||||||||| ||||| || |||||| |||| ||||||   |||    ||||   |||  U
  CGA CAAGCCAAC AGGUC UA CUUCGG UCUU AUAAGG   GAC    UUAG   AUG  U
CC   A         -     C  A      -    A      -UG   UAUU    AAU   UU
Stem-loop sequence GCUGUUCGGUUGCUCCGGAAUGGAGGCCUGGAACUAUUCCUGUCUGGAUUGUUUACCUAUUUUGUAUAAGAUUUUAUCAGGUGGAAUAAUUCUGGCUUCAAUCCUGGACAACCGAACAAGCCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT040386.1
ncRNA:24   CCCGAACAAGCCAACAGGUCCUAA   1
  ||||||||||||||||||||||||
targets:822   GGGCUUGUUCGGUUGUCCAGGAUU   845

0.0 Zea mays full-length cDNA clone ZM_BFc0088H06 mRNA, complete cds NA coding protein psRNATarget