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BaseInfo

ncRNA ID novel_zma_miR8916
Species Zea mays
Class miRNA
Genome position Chr4:223091800-223091884 [-]
Reference genome RefGen_v4
Source SRR4237221;SRR4237223;SRR4237224;SRR4237225;SRR4237226;SRR4237227;SRR5100248;SRR5100255
Length 24
Mature sequence(if miRNA) 1 - AUCAAACUGGAGAAACCUAACAAG - 24
Stem-loop(if miRNA) --   AG     -   G -      UUUGU    -  ---    UU
  UGU  AGGUU CUC A UUUGGU     UAGU CA   CCCU  C
  |||  ||||| ||| | ||||||     |||| ||   ||||
  ACA  UCCAA GAG U AAACUA     AUCA GU   GGGG  U
GA   -A     A   G C      UUUGU    U  AGA    UU
Stem-loop sequence UGUAGAGGUUCUCGAUUUGGUUUUGUUAGUCACCCUUUCUUUGGGGAGAUGUACUAUGUUUAUCAAACUGGAGAAACCUAACAAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020542196.1
ncRNA:24   GAACAAUCCAAAGAGGUCAAACUA   1
  |***||||||||||||||||||||
targets:1620   CCCAUUAGGUUUCUCCAGUUUGAU   1643

0.0 PREDICTED: Zea mays OSJNBa0059D20.8-like protein (LOC100304325), transcript variant X6, mRNA NA coding protein psRNATarget