Search result

BaseInfo

ncRNA ID	novel_zma_miR8908
Species	Zea mays
Class	miRNA
Genome position	Chr4:205738818-205738876 [+]
Reference genome	RefGen_v4
Source	SRR4237221;SRR4237223;SRR4237224;SRR4237225
Length	24
Mature sequence(if miRNA)	36 - AAAGGAACUAGAACGGAAUGACUC - 59
Stem-loop(if miRNA)	--          CU      UG    UGU   GUUAUUCUGU  UAGUUU  UUGU   U   ||||||||||  ||||||  ||||   U   CAGUAAGGCA  AUCAAG  AACA   G CU          AG      GA    UUG
Stem-loop sequence	GUUAUUCUGUCUUAGUUUUGUUGUUGUUUGGUUACAAAGGAACUAGAACGGAAUGACUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020546669.1	ncRNA:24   CUCAGUAAGGCAAGAUCAAGGAAA   1   ||||||||=||||||||||||||| targets:28   GAGUCAUUUCGUUCUAGUUCCUUU   51 Target Full Sequence	1.0	PREDICTED: Zea mays hypothetical protein (LOC103643194), transcript variant X1, mRNA	NA	coding protein	psRNATarget
HI409686.1	ncRNA:24   CUCAGUAAGGCAAGAUCAAGGAAA   1   |||*||*||||||||||||*|||| targets:108   GAGCCACUCCGUUCUAGUUACUUU   131 Target Full Sequence	2.5	Sequence 7811 from Patent EP2074227	NA	coding protein	psRNATarget
JB170147.1	ncRNA:24   CUCAGUAAGGCAAGAUCAAGGAAA   1   |||*||*||||||||||||*|||| targets:108   GAGCCACUCCGUUCUAGUUACUUU   131 Target Full Sequence	2.5	Sequence 7811 from Patent EP2559767	NA	coding protein	psRNATarget
LQ241816.1	ncRNA:24   CUCAGUAAGGCAAGAUCAAGGAAA   1   |||*||*||||||||||||*|||| targets:108   GAGCCACUCCGUUCUAGUUACUUU   131 Target Full Sequence	2.5	Sequence 7811 from Patent EP2985353	NA	coding protein	psRNATarget