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BaseInfo

ncRNA ID	novel_zma_miR8879
Species	Zea mays
Class	miRNA
Genome position	Chr3:211470597-211470742 [-]
Reference genome	RefGen_v4
Source	SRR4237221
Length	21
Mature sequence(if miRNA)	126 - UCGACCGUGGGCAGAGGCCCC - 146
Stem-loop(if miRNA)	--   A                   A      -C     ----G     U --  --  CGAGUACUGUUCUGUUAUG   UCG CCGUGGGCAGAGGCCCCCG CCGGCG  CCUGU     AACAG A  AC  AG                   G   ||| ||||||||||||||||||| ||||||  |||||     ||||| |  ||  ||   AGC GGCACCCGUCUCCGGGGGC GGCUGC  GGACG     CUAUG G  AG  AU                   U CG   C                   C      AA     GGUAG     - GG  AG  UAGGGAGUGGCUAGAUCGC
Stem-loop sequence	UCGACCGUGGGCAGAGGCCCCCGACCGGCGCCCUGUGAACAGUAACAGCGAGUACUGUUCUGUUAUGGUCGCUAGAUCGGUGAGGGAUUAGAGAGGGGUAUCGAUGGGCAGGAACGUCGGCCGGGGGCCUCUGCCCACGGCCGAGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020538874.1	ncRNA:21   CCCCGGAGACGGGUGCCAGCU   1   *|||||||||||||||||||| targets:2430   AGGGCCUCUGCCCACGGUCGA   2450 Target Full Sequence	0.0	PREDICTED: Zea mays hypothetical protein (cl50727_1), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020538874.1	ncRNA:21   CC-CCGGAGACGGGUGCCAGCU   1   ||-||||||||||||||||||| targets:954   GGAGGCCUCUGCCCACGGUCGA   975 Target Full Sequence	2.0	PREDICTED: Zea mays hypothetical protein (cl50727_1), transcript variant X3, mRNA	NA	coding protein	psRNATarget
BT085144.2	ncRNA:21   CCCCGGAGACGGGUGCCAGCU   1   *||||||||||||||||*||| targets:605   AGGGCCUCUGCCCACGGCCGA   625 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0304I05 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001196878.1	ncRNA:21   CCCCGGAGACGGGUGCCAGCU   1   |||||||*|||||||||*||| targets:1486   GGGGCCUGUGCCCACGGCCGA   1506 Target Full Sequence	2.5	Zea mays alpha/beta-Hydrolases superfamily protein (LOC100502400), transcript variant 2, mRNA	NA	coding protein	psRNATarget
BT088012.1	ncRNA:21   CCCCGGAGACGGGUGCCAGCU   1   |||||||*|||||||||*||| targets:1486   GGGGCCUGUGCCCACGGCCGA   1506 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0354D10 mRNA, complete cds	NA	coding protein	psRNATarget