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BaseInfo

ncRNA ID	novel_zma_miR8875
Species	Zea mays
Class	miRNA
Genome position	Chr3:18203159-18203212 [+]
Reference genome	RefGen_v4
Source	SRR1997865;SRR1997866;SRR2089703
Length	24
Mature sequence(if miRNA)	31 - AGGCACUCGGCAAAGAUACUAGCA - 54
Stem-loop(if miRNA)	-CAA  A                 GUU     AG UAUCUUUGCCGAGUGCU   G     || |||||||||||||||||     UC AUAGAAACGGCUCACGG   C ACGA  -                 AAC
Stem-loop sequence	CAAAGAUAUCUUUGCCGAGUGCUGUUGCCAAGGCACUCGGCAAAGAUACUAGCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ087925.1	ncRNA:24   ACGAUCAUAGAAACGGCUCACGGA   1   ||=|=|**|||||||||||||||| targets:47   UGUUGGCUUCUUUGCCGAGUGCCU   70 Target Full Sequence	2.0	TSA: Zea mays contig23571, mRNA sequence	NA	coding protein	psRNATarget
BT067215.1	ncRNA:24   ACGAUCAUAGAAACGGCUCACGGA   1   ||=|=|**|||||||||||||||| targets:1146   UGUUGGCUUCUUUGCCGAGUGCCU   1169 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0310H18 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001175109.1	ncRNA:24   ACGAUCAUAGAAACGGCUCACGGA   1   ||=|=|**|||||||||||||||| targets:1283   UGUUGGCUUCUUUGCCGAGUGCCU   1306 Target Full Sequence	2.0	Zea mays 1-aminocyclopropane-1-carboxylate oxidase2 (cl955_1), mRNA	NA	coding protein	psRNATarget
BT064046.1	ncRNA:24   ACGAUCAUAGAAACGGCUCACGGA   1   ||=|=|**|||||||||||||||| targets:1283   UGUUGGCUUCUUUGCCGAGUGCCU   1306 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFc0133L10 mRNA, complete cds	NA	coding protein	psRNATarget
EZ067174.1	ncRNA:24   ACGAUCAUAGAAACGGCUCACGGA   1   *||*|||||*||||||||||||=| targets:55   CGCCAGUAUAUUUGCCGAGUGCUU   78 Target Full Sequence	2.5	TSA: Zea mays contig02808, mRNA sequence	NA	coding protein	psRNATarget
EU971646.1	ncRNA:24   ACGAUCAUAGAAACGGCUCACGGA   1   ***|*||=|||||||||||||=|| targets:822   GAAUCGUGUCUUUGCCGAGUGUCU   845 Target Full Sequence	2.5	Zea mays clone 368614 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
HI409785.1	ncRNA:24   ACGAUCAUAGAAACGGCUCACGGA   1   *|*|***||||||||||||||||* targets:11   AGAUUCCAUCUUUGCCGAGUGCCA   34 Target Full Sequence	3.0	Sequence 7910 from Patent EP2074227	NA	coding protein	psRNATarget
JB170246.1	ncRNA:24   ACGAUCAUAGAAACGGCUCACGGA   1   *|*|***||||||||||||||||* targets:11   AGAUUCCAUCUUUGCCGAGUGCCA   34 Target Full Sequence	3.0	Sequence 7910 from Patent EP2559767	NA	coding protein	psRNATarget
LQ241915.1	ncRNA:24   ACGAUCAUAGAAACGGCUCACGGA   1   *|*|***||||||||||||||||* targets:11   AGAUUCCAUCUUUGCCGAGUGCCA   34 Target Full Sequence	3.0	Sequence 7910 from Patent EP2985353	NA	coding protein	psRNATarget