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BaseInfo

ncRNA ID novel_zma_miR8868
Species Zea mays
Class miRNA
Genome position Chr3:163731107-163731231 [+]
Reference genome RefGen_v4
Source SRR4237221;SRR4237226
Length 24
Mature sequence(if miRNA) 102 - AACAAGAACCGGCGGCGGUGCCCU - 125
Stem-loop(if miRNA) --A        A                 U         C       C             U
   GCACCGCC CCGGUUCUUGUUGAGUG UUGGCGCUC AAAAAGG GUCAACAUACUUU U
   |||||||| ||||||||||||||||| ||||||||| ||||||| ||||||||||||| U
   CGUGGCGG GGCCAAGAACAACUCAC AACCGCGGG UUUUUCC CGGUUGUAUGAAA A
UCC        C                 U         U       A             A
Stem-loop sequence AGCACCGCCACCGGUUCUUGUUGAGUGUUUGGCGCUCCAAAAAGGCGUCAACAUACUUUUUUAAAAAGUAUGUUGGCACCUUUUUUGGGCGCCAAUCACUCAACAAGAACCGGCGGCGGUGCCCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ057226.1
ncRNA:24   UCCCGUGGCGGCGGCCAAGAACAA   1
  |*|||=|||||||||||||||*||
targets:69   ACGGCGCCGCCGCCGGUUCUUCUU   92

2.5 TSA: Zea mays contig58348, mRNA sequence NA coding protein psRNATarget