ncRNA ID | novel_zma_miR8868 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr3:163731107-163731231 [+] |
Reference genome | RefGen_v4 |
Source | SRR4237221;SRR4237226 |
Length | 24 |
Mature sequence(if miRNA) | 102 - AACAAGAACCGGCGGCGGUGCCCU - 125 |
Stem-loop(if miRNA) |
--A        A                 U         C       C             U    GCACCGCC CCGGUUCUUGUUGAGUG UUGGCGCUC AAAAAGG GUCAACAUACUUU U    |||||||| ||||||||||||||||| ||||||||| ||||||| ||||||||||||| U    CGUGGCGG GGCCAAGAACAACUCAC AACCGCGGG UUUUUCC CGGUUGUAUGAAA A UCC        C                 U         U       A             A |
Stem-loop sequence | AGCACCGCCACCGGUUCUUGUUGAGUGUUUGGCGCUCCAAAAAGGCGUCAACAUACUUUUUUAAAAAGUAUGUUGGCACCUUUUUUGGGCGCCAAUCACUCAACAAGAACCGGCGGCGGUGCCCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ057226.1 |
|
2.5 | TSA: Zea mays contig58348, mRNA sequence | NA | coding protein | psRNATarget |