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BaseInfo

ncRNA ID novel_zma_miR8866
Species Zea mays
Class miRNA
Genome position Chr10:67423746-67423831 [-]
Reference genome RefGen_v4
Source SRR4237221
Length 24
Mature sequence(if miRNA) 1 - AUCAAACUGGAGAAACCUAACAAG - 24
Stem-loop(if miRNA) -UGCAG     -    GA      UUUGU    -  CC     U
      AGGUU CUUU  UUUGGU     UAGU CA  CUUCC U
      ||||| ||||  ||||||     |||| ||  |||||
      UCCAA GAGG  AAACUA     GUCA GU  GAGGG U
GAACAA     A    UC      UUUUU    U  -A     A
Stem-loop sequence UGCAGAGGUUCUUUGAUUUGGUUUUGUUAGUCACCCUUCCUUUAGGGAGAUGUACUGUUUUUAUCAAACUGGAGAAACCUAACAAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020542196.1
ncRNA:24   GAACAAUCCAAAGAGGUCAAACUA   1
  |***||||||||||||||||||||
targets:1620   CCCAUUAGGUUUCUCCAGUUUGAU   1643

0.0 PREDICTED: Zea mays OSJNBa0059D20.8-like protein (LOC100304325), transcript variant X6, mRNA NA coding protein psRNATarget