Search result

BaseInfo

ncRNA ID	novel_zma_miR8865
Species	Zea mays
Class	miRNA
Genome position	Chr2:43924861-43924912 [+]
Reference genome	RefGen_v4
Source	SRR4237221
Length	22
Mature sequence(if miRNA)	31 - UUGUUGAAGACUCUAUACGCCA - 52
Stem-loop(if miRNA)	UC  ---     A       C     C   GC   UAGAG CUUCAAC AAAUC G   ||   ||||| ||||||| |||||   CG   AUCUC GAAGUUG UUUAG A AC  CAU     A       -     U
Stem-loop sequence	UCGCUAGAGACUUCAACCAAAUCCGAUGAUUUGUUGAAGACUCUAUACGCCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
HI409394.1	ncRNA:22   ACCGCAUAUCUCAGAAGUUGUU   1   *||||||||||||||||||||| targets:20   GGGCGUAUAGAGUCUUCAACAA   41 Target Full Sequence	0.0	Sequence 7519 from Patent EP2074227	NA	coding protein	psRNATarget
JB169855.1	ncRNA:22   ACCGCAUAUCUCAGAAGUUGUU   1   *||||||||||||||||||||| targets:20   GGGCGUAUAGAGUCUUCAACAA   41 Target Full Sequence	0.0	Sequence 7519 from Patent EP2559767	NA	coding protein	psRNATarget
LQ241524.1	ncRNA:22   ACCGCAUAUCUCAGAAGUUGUU   1   *||||||||||||||||||||| targets:20   GGGCGUAUAGAGUCUUCAACAA   41 Target Full Sequence	0.0	Sequence 7519 from Patent EP2985353	NA	coding protein	psRNATarget
JB170360.1	ncRNA:22   ACCGCAUAUCUCAGAAGUUGUU   1   *|||*||||||||||||||||| targets:18   GGGCAUAUAGAGUCUUCAACAA   39 Target Full Sequence	1.0	Sequence 8024 from Patent EP2559767	NA	coding protein	psRNATarget
LQ242029.1	ncRNA:22   ACCGCAUAUCUCAGAAGUUGUU   1   *|||*||||||||||||||||| targets:18   GGGCAUAUAGAGUCUUCAACAA   39 Target Full Sequence	1.0	Sequence 8024 from Patent EP2985353	NA	coding protein	psRNATarget
JB170208.1	ncRNA:22   ACCGCAUAUCUCAGAAGUUGUU   1   *|||*||||||||||||||||| targets:18   GGGCAUAUAGAGUCUUCAACAA   39 Target Full Sequence	1.0	Sequence 7872 from Patent EP2559767	NA	coding protein	psRNATarget
LQ241501.1	ncRNA:22   ACCGCAUAUCUCAGAAGUUGUU   1   *|||*||||||||||||||||| targets:18   GGGCAUAUAGAGUCUUCAACAA   39 Target Full Sequence	1.0	Sequence 7496 from Patent EP2985353	NA	coding protein	psRNATarget
LQ241877.1	ncRNA:22   ACCGCAUAUCUCAGAAGUUGUU   1   *|||*||||||||||||||||| targets:18   GGGCAUAUAGAGUCUUCAACAA   39 Target Full Sequence	1.0	Sequence 7872 from Patent EP2985353	NA	coding protein	psRNATarget
JB169832.1	ncRNA:22   ACCGCAUAUCUCAGAAGUUGUU   1   *|||*||||||||||||||||| targets:18   GGGCAUAUAGAGUCUUCAACAA   39 Target Full Sequence	1.0	Sequence 7496 from Patent EP2559767	NA	coding protein	psRNATarget
HI409747.1	ncRNA:22   ACCGCAUAUCUCAGAAGUUGUU   1   *|||*||||||||||||||||| targets:18   GGGCAUAUAGAGUCUUCAACAA   39 Target Full Sequence	1.0	Sequence 7872 from Patent EP2074227	NA	coding protein	psRNATarget
HI409899.1	ncRNA:22   ACCGCAUAUCUCAGAAGUUGUU   1   *|||*||||||||||||||||| targets:18   GGGCAUAUAGAGUCUUCAACAA   39 Target Full Sequence	1.0	Sequence 8024 from Patent EP2074227	NA	coding protein	psRNATarget
HI409371.1	ncRNA:22   ACCGCAUAUCUCAGAAGUUGUU   1   *|||*||||||||||||||||| targets:18   GGGCAUAUAGAGUCUUCAACAA   39 Target Full Sequence	1.0	Sequence 7496 from Patent EP2074227	NA	coding protein	psRNATarget
JB169753.1	ncRNA:22   ACCGCAUAUCUCAGAAGUUGUU   1   *|||*|||||||||||=||||| targets:18   GGGCAUAUAGAGUCUUUAACAA   39 Target Full Sequence	2.5	Sequence 7417 from Patent EP2559767	NA	coding protein	psRNATarget
LQ242031.1	ncRNA:22   ACCGCAUAUCUCAGAAGUUGUU   1   *|||*|||||||||||=||||| targets:18   GGGCAUAUAGAGUCUUUAACAA   39 Target Full Sequence	2.5	Sequence 8026 from Patent EP2985353	NA	coding protein	psRNATarget
HI409098.1	ncRNA:22   ACCGCAUAUCUCAGAAGUUGUU   1   *|||*|||||||||||=||||| targets:18   GGGCAUAUAGAGUCUUUAACAA   39 Target Full Sequence	2.5	Sequence 7223 from Patent EP2074227	NA	coding protein	psRNATarget
LQ241422.1	ncRNA:22   ACCGCAUAUCUCAGAAGUUGUU   1   *|||*|||||||||||=||||| targets:18   GGGCAUAUAGAGUCUUUAACAA   39 Target Full Sequence	2.5	Sequence 7417 from Patent EP2985353	NA	coding protein	psRNATarget
JB169559.1	ncRNA:22   ACCGCAUAUCUCAGAAGUUGUU   1   *|||*|||||||||||=||||| targets:18   GGGCAUAUAGAGUCUUUAACAA   39 Target Full Sequence	2.5	Sequence 7223 from Patent EP2559767	NA	coding protein	psRNATarget
JB170233.1	ncRNA:22   ACCGCAUAUCUCAGAAGUUGUU   1   *|||*|||||||||||=||||| targets:18   GGGCAUAUAGAGUCUUUAACAA   39 Target Full Sequence	2.5	Sequence 7897 from Patent EP2559767	NA	coding protein	psRNATarget
HI409901.1	ncRNA:22   ACCGCAUAUCUCAGAAGUUGUU   1   *|||*|||||||||||=||||| targets:18   GGGCAUAUAGAGUCUUUAACAA   39 Target Full Sequence	2.5	Sequence 8026 from Patent EP2074227	NA	coding protein	psRNATarget
LQ241228.1	ncRNA:22   ACCGCAUAUCUCAGAAGUUGUU   1   *|||*|||||||||||=||||| targets:18   GGGCAUAUAGAGUCUUUAACAA   39 Target Full Sequence	2.5	Sequence 7223 from Patent EP2985353	NA	coding protein	psRNATarget
HI409691.1	ncRNA:22   ACCGCAUAUCUCAGAAGUUGUU   1   *|||*|||||||||||=||||| targets:18   GGGCAUAUAGAGUCUUUAACAA   39 Target Full Sequence	2.5	Sequence 7816 from Patent EP2074227	NA	coding protein	psRNATarget
LQ241902.1	ncRNA:22   ACCGCAUAUCUCAGAAGUUGUU   1   *|||*|||||||||||=||||| targets:18   GGGCAUAUAGAGUCUUUAACAA   39 Target Full Sequence	2.5	Sequence 7897 from Patent EP2985353	NA	coding protein	psRNATarget
JB170152.1	ncRNA:22   ACCGCAUAUCUCAGAAGUUGUU   1   *|||*|||||||||||=||||| targets:18   GGGCAUAUAGAGUCUUUAACAA   39 Target Full Sequence	2.5	Sequence 7816 from Patent EP2559767	NA	coding protein	psRNATarget
JB170362.1	ncRNA:22   ACCGCAUAUCUCAGAAGUUGUU   1   *|||*|||||||||||=||||| targets:18   GGGCAUAUAGAGUCUUUAACAA   39 Target Full Sequence	2.5	Sequence 8026 from Patent EP2559767	NA	coding protein	psRNATarget
HI409292.1	ncRNA:22   ACCGCAUAUCUCAGAAGUUGUU   1   *|||*|||||||||||=||||| targets:18   GGGCAUAUAGAGUCUUUAACAA   39 Target Full Sequence	2.5	Sequence 7417 from Patent EP2074227	NA	coding protein	psRNATarget
LQ241821.1	ncRNA:22   ACCGCAUAUCUCAGAAGUUGUU   1   *|||*|||||||||||=||||| targets:18   GGGCAUAUAGAGUCUUUAACAA   39 Target Full Sequence	2.5	Sequence 7816 from Patent EP2985353	NA	coding protein	psRNATarget
HI409772.1	ncRNA:22   ACCGCAUAUCUCAGAAGUUGUU   1   *|||*|||||||||||=||||| targets:18   GGGCAUAUAGAGUCUUUAACAA   39 Target Full Sequence	2.5	Sequence 7897 from Patent EP2074227	NA	coding protein	psRNATarget
JB169778.1	ncRNA:22   ACCGCAUAUCUCAGAAGUUGUU   1   *|||*|||||||||||=||||| targets:20   AGGCAUAUAGAGUCUUUAACAA   41 Target Full Sequence	2.5	Sequence 7442 from Patent EP2559767	NA	coding protein	psRNATarget
LQ241447.1	ncRNA:22   ACCGCAUAUCUCAGAAGUUGUU   1   *|||*|||||||||||=||||| targets:20   AGGCAUAUAGAGUCUUUAACAA   41 Target Full Sequence	2.5	Sequence 7442 from Patent EP2985353	NA	coding protein	psRNATarget
HI409317.1	ncRNA:22   ACCGCAUAUCUCAGAAGUUGUU   1   *|||*|||||||||||=||||| targets:20   AGGCAUAUAGAGUCUUUAACAA   41 Target Full Sequence	2.5	Sequence 7442 from Patent EP2074227	NA	coding protein	psRNATarget