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BaseInfo

ncRNA ID novel_zma_miR8857
Species Zea mays
Class miRNA
Genome position Chr2:150965766-150965819 [-]
Reference genome RefGen_v4
Source SRR4237221
Length 24
Mature sequence(if miRNA) 1 - UAUAGAACAGAAGGGCACAGCUGA - 24
Stem-loop(if miRNA) --             CA  G      A
  AGCUGUGUUUUUC  GU CUAUAG A
  |||||||||||||  || |||||| G
  UCGACACGGGAAG  CA GAUAUC U
AG             -A  A      G
Stem-loop sequence AGCUGUGUUUUUCCAGUGCUAUAGAAGUGCUAUAGAACAGAAGGGCACAGCUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT055615.2
ncRNA:24   AGUCGACACGGGAAGACAAGAUAU   1
  ||||=|*|||||||=|||||||||
targets:52   UCAGUUUUGCCCUUUUGUUCUAUA   75

2.5 Zea mays full-length cDNA clone ZM_BFc0072O22 mRNA, complete cds NA coding protein psRNATarget
BT062450.2
ncRNA:24   AGUCGACACGGGAAGACAAGAUAU   1
  ||||=|*||==|||||||||||||
targets:399   UCAGUUUUGUUCUUCUGUUCUAUA   422

3.0 Zea mays full-length cDNA clone ZM_BFb0299A08 mRNA, complete cds NA coding protein psRNATarget