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BaseInfo

ncRNA ID	novel_zma_miR8853
Species	Zea mays
Class	miRNA
Genome position	Chr10:86160517-86160580 [-]
Reference genome	RefGen_v4
Source	SRR4237221;SRR4237222;SRR4237226;SRR4237227
Length	24
Mature sequence(if miRNA)	41 - AUAGAUCACGUUGUUGGAGAUGCU - 64
Stem-loop(if miRNA)	--A   A    G               AUUGG    UAG UCAC UUGUUGGAGAUGCUC     U    ||| |||| |||||||||||||||    AUU AGUG AACAACUUCUACGAG     A AAA   C    G               AUUUU
Stem-loop sequence	AUAGAUCACGUUGUUGGAGAUGCUCAUUGGUAUUUUAGAGCAUCUUCAACAAGGUGACUUAAAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ086363.1	ncRNA:24   UCGUAGAGGUUGUUGCACUAGAUA   1   |||||||||||||||||||*|||| targets:166   AGCAUCUCCAACAACGUGACCUAU   189 Target Full Sequence	1.5	TSA: Zea mays contig22009, mRNA sequence	NA	coding protein	psRNATarget
EU976198.1	ncRNA:24   UCGUAGAGGUUGUUGCACUAGAUA   1   |||||||||||||||||||*|||| targets:957   AGCAUCUCCAACAACGUGACCUAU   980 Target Full Sequence	1.5	Zea mays clone 687524 mRNA sequence	NA	coding protein	psRNATarget
BT061915.1	ncRNA:24   UCGUAGAGGUUGUUGCACUAGAUA   1   |||||||||||||||||||*|||| targets:2572   AGCAUCUCCAACAACGUGACCUAU   2595 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0197K09 mRNA, complete cds	NA	coding protein	psRNATarget
BT041346.1	ncRNA:24   UCGUAGAGGUUGUUGCACUAGAUA   1   |||||||||||||||||||*|||| targets:2567   AGCAUCUCCAACAACGUGACCUAU   2590 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0024K15 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001147951.1	ncRNA:24   UCGUAGAGGUUGUUGCACUAGAUA   1   |||||||||||||||||||*|||| targets:2567   AGCAUCUCCAACAACGUGACCUAU   2590 Target Full Sequence	1.5	Zea mays Potassium transporter 2 (si603031f07b), transcript variant 1, mRNA	NA	coding protein	psRNATarget
BT054422.1	ncRNA:24   UCGUAGAGGUUGUUGCACUAGAUA   1   |||||||||||||||||||*|||| targets:2556   AGCAUCUCCAACAACGUGACCUAU   2579 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0048K02 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001159448.1	ncRNA:24   UCGUAGAGGUUGUUGCACUAGAUA   1   |||||||||||||||||||*|||| targets:2556   AGCAUCUCCAACAACGUGACCUAU   2579 Target Full Sequence	1.5	Zea mays Potassium transporter 2 (si603031f07b), transcript variant 2, mRNA	NA	coding protein	psRNATarget
XM_008666036.2	ncRNA:24   UCGUAGAGGUUGUUGCACUAGAUA   1   |||||||=|||||||||||*|||| targets:1679   AGCAUCUUCAACAACGUGACCUAU   1702 Target Full Sequence	2.5	PREDICTED: Zea mays disease resistance protein RGA2 (LOC103642866), mRNA	NA	coding protein	psRNATarget