Search result

BaseInfo

ncRNA ID novel_zma_miR8847
Species Zea mays
Class miRNA
Genome position Chr2:231447511-231447599 [+]
Reference genome RefGen_v4
Source SRR4237221;SRR4237225
Length 22
Mature sequence(if miRNA) 68 - UACCUUUAAGCUAUUGUACGCC - 89
Stem-loop(if miRNA) U    -     A       CAAA     AAUUUUGGUUUCAAGAA
 GUGU CAAUA GUUUAAG    UGAAA                 A
 |||| ||||| |||||||    |||||                 U
 CGCA GUUAU CGAAUUU    AUGUU                 A
C    U     -       --CC     UUUACUCCAGAAACAUA
Stem-loop sequence UGUGUCAAUAAGUUUAAGCAAAUGAAAAAUUUUGGUUUCAAGAAAUAAUACAAAGACCUCAUUUUUGUACCUUUAAGCUAUUGUACGCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020552592.1
ncRNA:22   CCGCAUGUUAUCGAAUUUCCAU   1
  *||*|||||||||||=||||||
targets:2186   UGCUUACAAUAGCUUGAAGGUA   2207

2.5 PREDICTED: Zea mays uncharacterized LOC103653543 (LOC103653543), mRNA NA coding protein psRNATarget