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BaseInfo

ncRNA ID	novel_zma_miR8845
Species	Zea mays
Class	miRNA
Genome position	Chr2:18545149-18545210 [+]
Reference genome	RefGen_v4
Source	SRR4237221
Length	24
Mature sequence(if miRNA)	1 - GUCGCAUGGCGCACAGGACAGUCC - 24
Stem-loop(if miRNA)	--  C  A        A     --           GU GC UGGCGCAC GGACA  GUCCGGUGC   || || |||||||| |||||  ||||||||G   CA CG ACUGCGUG CCUGU  CAGGCCACC UG  C  -        G     GA
Stem-loop sequence	GUCGCAUGGCGCACAGGACAGUCCGGUGCGCCACCGGACAGUGUCCGGUGCGUCAGCCACGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
U41079.1	ncRNA:24   CCUGACAGGACACGCGGUACGCUG   1   |||||||||*|||||||||||||| targets:272   GGACUGUCCGGUGCGCCAUGCGAC   295 Target Full Sequence	1.0	Zea mays copia-type retroelement PREM-2, partial sequence	NA	coding protein	psRNATarget
EU970212.1	ncRNA:24   CCUGACAGGACACGCGGUACGCUG   1   |||||||||*|||||||||||||| targets:750   GGACUGUCCGGUGCGCCAUGCGAC   773 Target Full Sequence	1.0	Zea mays clone 342257 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
XM_020548733.1	ncRNA:24   CCUGACAGGACACGCGGUACGCUG   1   |||||||||*|||||||||||||| targets:2203   GGACUGUCCGGUGCGCCAUGCGAC   2226 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized mitochondrial protein AtMg00810-like (LOC109944105), mRNA	NA	coding protein	psRNATarget
BT054293.1	ncRNA:24   CCUGACAGGACACGCGGUACGCUG   1   |||||||||*|||||||||||||| targets:2209   GGACUGUCCGGUGCGCCAUGCGAC   2232 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0218B09 mRNA, complete cds	NA	coding protein	psRNATarget
BT042818.1	ncRNA:24   CCUGACAGGACACGCGGUACGCUG   1   |||||||||*||||*||||||||| targets:842   GGACUGUCCGGUGCACCAUGCGAC   865 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0047A15 mRNA, complete cds	NA	coding protein	psRNATarget
BT019242.1	ncRNA:24   CCUGACAGGACACGCGGUACGCUG   1   |||||||||*||||||||*||||| targets:962   GGACUGUCCGGUGCGCCAGGCGAC   985 Target Full Sequence	2.5	Zea mays clone Contig915.F mRNA sequence	NA	coding protein	psRNATarget
BT064671.1	ncRNA:24   CCUGACAGGACACGCGGUACGCUG   1   |||||||||*|||||||||*|||| targets:1273   GGACUGUCCGGUGCGCCAUACGAC   1296 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0008J22 mRNA, complete cds	NA	coding protein	psRNATarget
BT065862.1	ncRNA:24   CCUGACAGGACACGCGGUACGCUG   1   |||||||||*||||||||*||||| targets:1301   GGACUGUCCGGUGCGCCAGGCGAC   1324 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0155J05 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001175661.1	ncRNA:24   CCUGACAGGACACGCGGUACGCUG   1   |||||||||*||||||||*||||| targets:1301   GGACUGUCCGGUGCGCCAGGCGAC   1324 Target Full Sequence	2.5	Zea mays uncharacterized LOC100382977 (LOC100382977), mRNA	NA	coding protein	psRNATarget
BT060603.1	ncRNA:24   CCUGACAGGACACGCGGUACGCUG   1   |||||||||*||||*||||||||| targets:1556   GGACUGUCCGGUGCACCAUGCGAC   1579 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0021N16 mRNA, complete cds	NA	coding protein	psRNATarget
BT066975.1	ncRNA:24   CCUGACAGGACACGCGGUACGCUG   1   |||||||||*||||||||*||||| targets:2487   GGACUGUCCGGUGCGCCAGGCGAC   2510 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0133B08 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001176009.1	ncRNA:24   CCUGACAGGACACGCGGUACGCUG   1   |||||||||*||||||||*||||| targets:2487   GGACUGUCCGGUGCGCCAGGCGAC   2510 Target Full Sequence	2.5	Zea mays uncharacterized LOC100383353 (LOC100383353), mRNA	NA	coding protein	psRNATarget