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BaseInfo

ncRNA ID osa-miRf10481-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 24
Mature sequence(if miRNA) NA - UCGAUGGUGGCGUCGUAGUCCUUG - NA
Stem-loop(if miRNA) -C  UC         G        GU  --     GG   C    AGC
  GG  GUCGGGGAC GCGGCGCC  CG  GAGUU  ACU GGCG   A
  ||  ||||||||| ||||||||  ||  |||||  ||| ||||
  CC  CGGUUCCUG UGCUGCGG  GU  CUCAA  UGA CCGC   U
GU  --         A        UG  AG     GA   C    GGG
Stem-loop sequence CGGUCGUCGGGGACGGCGGCGCCGUCGGAGUUGGACUCGGCGAGCAUGGGCGCCCAGUAGAACUCGAUGGUGGCGUCGUAGUCCUUGGCCCUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK065071.1
ncRNA:24   GUUCCUGAUGCUGCGGUGGUAGCU   1
  ||||||||||||||||||||||||
targets:2126   CAAGGACUACGACGCCACCAUCGA   2149

0.0 Oryza sativa Japonica Group cDNA clone:J013001K07, full insert sequence NA coding protein psRNATarget
XM_015774365.1
ncRNA:24   GUUCCUGAUGCUGCGGUGGUAGCU   1
  ||||||||||||||||||||||||
targets:558   CAAGGACUACGACGCCACCAUCGA   581

0.0 PREDICTED: Oryza sativa Japonica Group protein trichome birefringence-like 33 (LOC4334574), mRNA protein trichome birefringence-like 33(LOC4334574) coding protein psRNATarget
AK061407.1
ncRNA:24   GUUCCUGAUGCUGCGGUGGUAGCU   1
  ||||||||||||||||||||||||
targets:546   CAAGGACUACGACGCCACCAUCGA   569

0.0 Oryza sativa Japonica Group cDNA clone:006-306-A07, full insert sequence NA coding protein psRNATarget
AK104541.1
ncRNA:24   GUUCCUGAUGCUGCGGUGGUAGCU   1
  ||||||||||||||||||||||||
targets:501   CAAGGACUACGACGCCACCAUCGA   524

0.0 Oryza sativa Japonica Group cDNA clone:006-305-A10, full insert sequence NA coding protein psRNATarget
XM_015779780.1
ncRNA:24   GUUCCUGAUGCUGCGGUGGUAGCU   1
  |=|*|||*||||*|||||||||||
targets:415   CGACGACGACGAGGCCACCAUCGA   438

2.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107280706 (LOC107280706), mRNA uncharacterized LOC107280706(LOC107280706) coding protein psRNATarget