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BaseInfo

ncRNA ID	novel_zma_miR8825
Species	Zea mays
Class	miRNA
Genome position	Chr1:90407758-90407890 [-]
Reference genome	RefGen_v4
Source	SRR4237221
Length	24
Mature sequence(if miRNA)	1 - AAAGACUGCUUUGUCGAGUGCCCG - 24
Stem-loop(if miRNA)	--                U           U  UUCC  GUGCCAAGUGUCAUGCGCUCGGUAAACGU   GGCACUCGGCAAAGCA UCUUUGCCGAG GU    CU                             G   |||||||||||||||| ||||||||||| ||    ||   CCGUGAGCUGUUUCGU AGAAACGGCUC CG    CG                             G GC                C           C  ---G  UGAGCCGUUUCAAGAUUAGAGCCACCACU
Stem-loop sequence	GGCACUCGGCAAAGCAUUCUUUGCCGAGUGUUUCCCUGUGCCAAGUGUCAUGCGCUCGGUAAACGUGGUCACCACCGAGAUUAGAACUUUGCCGAGUGCGGCCCUCGGCAAAGACUGCUUUGUCGAGUGCCCG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB166323.1	ncRNA:24   GCCCGUGAGCUGUUUCGUCAGAAA   1   **||||||||=|||||||*||||| targets:179   GCGGCACUCGGCAAAGCAUUCUUU   202 Target Full Sequence	2.5	Sequence 3987 from Patent EP2559767	NA	coding protein	psRNATarget
HI405862.1	ncRNA:24   GCCCGUGAGCUGUUUCGUCAGAAA   1   **||||||||=|||||||*||||| targets:179   GCGGCACUCGGCAAAGCAUUCUUU   202 Target Full Sequence	2.5	Sequence 3987 from Patent EP2074227	NA	coding protein	psRNATarget
LQ237992.1	ncRNA:24   GCCCGUGAGCUGUUUCGUCAGAAA   1   **||||||||=|||||||*||||| targets:179   GCGGCACUCGGCAAAGCAUUCUUU   202 Target Full Sequence	2.5	Sequence 3987 from Patent EP2985353	NA	coding protein	psRNATarget
JB166416.1	ncRNA:24   GCC--CGUGAGCUGUUUCGUCAGAAA   1   *||--|||||||=|||||||||||*| targets:71   GGGUAGCACUCGGCAAAGCAGUCUGU   96 Target Full Sequence	2.5	Sequence 4080 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238085.1	ncRNA:24   GCC--CGUGAGCUGUUUCGUCAGAAA   1   *||--|||||||=|||||||||||*| targets:71   GGGUAGCACUCGGCAAAGCAGUCUGU   96 Target Full Sequence	2.5	Sequence 4080 from Patent EP2985353	NA	coding protein	psRNATarget
HI405955.1	ncRNA:24   GCC--CGUGAGCUGUUUCGUCAGAAA   1   *||--|||||||=|||||||||||*| targets:71   GGGUAGCACUCGGCAAAGCAGUCUGU   96 Target Full Sequence	2.5	Sequence 4080 from Patent EP2074227	NA	coding protein	psRNATarget
BT084886.1	ncRNA:24   GCC--CGUGAGCUGUUUCGUCAGAAA   1   *||--|||||||=|||||||||||*| targets:88   GGGUAGCACUCGGCAAAGCAGUCUGU   113 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0200P15 mRNA, complete cds	NA	coding protein	psRNATarget