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BaseInfo

ncRNA ID	novel_zma_miR8824
Species	Zea mays
Class	miRNA
Genome position	Chr10:129100834-129100959 [-]
Reference genome	RefGen_v4
Source	SRR4237221;SRR4237224;SRR5105963
Length	24
Mature sequence(if miRNA)	1 - AUCCGACAGAAACGAACAAGACCU - 24
Stem-loop(if miRNA)	--GC           G          ----CAC   GAAUCGUUCCACUCAAUCAAAGUUUAUAU     CUUGUUCGUUU UGUCGGAUUG       CCG                             A     ||||||||||| ||||||||||       |||     GAACAAGCAAA ACAGCCUAAC       CCU                             A UCCA           G          CACCCAG   UGUUUAGGAUUGGCCUAACGAAGAGAUUA
Stem-loop sequence	GCCUUGUUCGUUUGUGUCGGAUUGCACCCGGAAUCGUUCCACUCAAUCAAAGUUUAUAUAAAUUAGAGAAGCAAUCCGGUUAGGAUUUGUUCCGACCCACCAAUCCGACAGAAACGAACAAGACCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB167800.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||||||||||||||||||||||| targets:9   AGGUCUUGUUCGUUUCUGUCGGAU   32 Target Full Sequence	0.0	Sequence 5464 from Patent EP2559767	NA	coding protein	psRNATarget
HI407339.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||||||||||||||||||||||| targets:9   AGGUCUUGUUCGUUUCUGUCGGAU   32 Target Full Sequence	0.0	Sequence 5464 from Patent EP2074227	NA	coding protein	psRNATarget
LQ239469.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||||||||||||||||||||||| targets:9   AGGUCUUGUUCGUUUCUGUCGGAU   32 Target Full Sequence	0.0	Sequence 5464 from Patent EP2985353	NA	coding protein	psRNATarget
EZ517098.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||||||||||||||*|||||||| targets:97   AGGUCUUGUUCGUUUGUGUCGGAU   120 Target Full Sequence	1.5	TSA: Zea mays cultivar W22 CL501Contig1.betc, mRNA sequence	NA	coding protein	psRNATarget
LQ238053.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|||||||||||||||||||| targets:238   AGGCCUUGUUCGUUUCUGUCGGAU   261 Target Full Sequence	0.0	Sequence 4048 from Patent EP2985353	NA	coding protein	psRNATarget
HI405923.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|||||||||||||||||||| targets:238   AGGCCUUGUUCGUUUCUGUCGGAU   261 Target Full Sequence	0.0	Sequence 4048 from Patent EP2074227	NA	coding protein	psRNATarget
JB166384.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|||||||||||||||||||| targets:238   AGGCCUUGUUCGUUUCUGUCGGAU   261 Target Full Sequence	0.0	Sequence 4048 from Patent EP2559767	NA	coding protein	psRNATarget
EU941248.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|||||||||||||||||||| targets:114   AGGCCUUGUUCGUUUCUGUCGGAU   137 Target Full Sequence	0.0	Zea mays clone 1431203 mRNA sequence	NA	coding protein	psRNATarget
BT041125.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||||||||||||||*|||||||| targets:1261   AGGUCUUGUUCGUUUGUGUCGGAU   1284 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0177J19 mRNA, complete cds	NA	coding protein	psRNATarget
EU965080.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|||||||||||||||||||| targets:1536   AGGCCUUGUUCGUUUCUGUCGGAU   1559 Target Full Sequence	0.0	Zea mays clone 283644 mRNA sequence	NA	coding protein	psRNATarget
XM_020540976.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|||||||||||||||||||| targets:4412   AGGCCUUGUUCGUUUCUGUCGGAU   4435 Target Full Sequence	0.0	PREDICTED: Zea mays indole-3-acetaldehyde oxidase-like (LOC103631977), transcript variant X1, mRNA	NA	coding protein	psRNATarget
LQ238091.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|||||||||||*|||||||| targets:9   AGGCCUUGUUCGUUUGUGUCGGAU   32 Target Full Sequence	1.5	Sequence 4086 from Patent EP2985353	NA	coding protein	psRNATarget
JB166422.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|||||||||||*|||||||| targets:9   AGGCCUUGUUCGUUUGUGUCGGAU   32 Target Full Sequence	1.5	Sequence 4086 from Patent EP2559767	NA	coding protein	psRNATarget
HI405961.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|||||||||||*|||||||| targets:9   AGGCCUUGUUCGUUUGUGUCGGAU   32 Target Full Sequence	1.5	Sequence 4086 from Patent EP2074227	NA	coding protein	psRNATarget
HI405928.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|||||||||||*|||||||| targets:10   AGGCCUUGUUCGUUUGUGUCGGAU   33 Target Full Sequence	1.5	Sequence 4053 from Patent EP2074227	NA	coding protein	psRNATarget
JB166395.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|||||||||||*|||||||| targets:10   AGGCCUUGUUCGUUUGUGUCGGAU   33 Target Full Sequence	1.5	Sequence 4059 from Patent EP2559767	NA	coding protein	psRNATarget
HI408744.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|||||||||||||*|||||| targets:10   AGGCCUUGUUCGUUUCUAUCGGAU   33 Target Full Sequence	1.5	Sequence 6869 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238064.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|||||||||||*|||||||| targets:10   AGGCCUUGUUCGUUUGUGUCGGAU   33 Target Full Sequence	1.5	Sequence 4059 from Patent EP2985353	NA	coding protein	psRNATarget
HI405934.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|||||||||||*|||||||| targets:10   AGGCCUUGUUCGUUUGUGUCGGAU   33 Target Full Sequence	1.5	Sequence 4059 from Patent EP2074227	NA	coding protein	psRNATarget
JB166389.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|||||||||||*|||||||| targets:10   AGGCCUUGUUCGUUUGUGUCGGAU   33 Target Full Sequence	1.5	Sequence 4053 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238061.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|||||||||||*|||||||| targets:10   AGGCCUUGUUCGUUUGUGUCGGAU   33 Target Full Sequence	1.5	Sequence 4056 from Patent EP2985353	NA	coding protein	psRNATarget
JB166392.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|||||||||||*|||||||| targets:10   AGGCCUUGUUCGUUUGUGUCGGAU   33 Target Full Sequence	1.5	Sequence 4056 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238058.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|||||||||||*|||||||| targets:10   AGGCCUUGUUCGUUUGUGUCGGAU   33 Target Full Sequence	1.5	Sequence 4053 from Patent EP2985353	NA	coding protein	psRNATarget
HI405931.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|||||||||||*|||||||| targets:10   AGGCCUUGUUCGUUUGUGUCGGAU   33 Target Full Sequence	1.5	Sequence 4056 from Patent EP2074227	NA	coding protein	psRNATarget
LQ240874.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|||||||||||||*|||||| targets:10   AGGCCUUGUUCGUUUCUAUCGGAU   33 Target Full Sequence	1.5	Sequence 6869 from Patent EP2985353	NA	coding protein	psRNATarget
JB169205.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|||||||||||||*|||||| targets:10   AGGCCUUGUUCGUUUCUAUCGGAU   33 Target Full Sequence	1.5	Sequence 6869 from Patent EP2559767	NA	coding protein	psRNATarget
HI405910.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|||||||||||*|||||||| targets:11   AGGCCUUGUUCGUUUGUGUCGGAU   34 Target Full Sequence	1.5	Sequence 4035 from Patent EP2074227	NA	coding protein	psRNATarget
JB166366.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|||||||||||*|||||||| targets:11   AGGCCUUGUUCGUUUGUGUCGGAU   34 Target Full Sequence	1.5	Sequence 4030 from Patent EP2559767	NA	coding protein	psRNATarget
JB166371.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|||||||||||*|||||||| targets:11   AGGCCUUGUUCGUUUGUGUCGGAU   34 Target Full Sequence	1.5	Sequence 4035 from Patent EP2559767	NA	coding protein	psRNATarget
HI405914.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|||||||||||*|||||||| targets:11   AGGCCUUGUUCGUUUGUGUCGGAU   34 Target Full Sequence	1.5	Sequence 4039 from Patent EP2074227	NA	coding protein	psRNATarget
JB166367.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|||||||||||*|||||||| targets:11   AGGCCUUGUUCGUUUGUGUCGGAU   34 Target Full Sequence	1.5	Sequence 4031 from Patent EP2559767	NA	coding protein	psRNATarget
HI405906.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|||||||||||*|||||||| targets:11   AGGCCUUGUUCGUUUGUGUCGGAU   34 Target Full Sequence	1.5	Sequence 4031 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238044.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|||||||||||*|||||||| targets:11   AGGCCUUGUUCGUUUGUGUCGGAU   34 Target Full Sequence	1.5	Sequence 4039 from Patent EP2985353	NA	coding protein	psRNATarget
LQ238040.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|||||||||||*|||||||| targets:11   AGGCCUUGUUCGUUUGUGUCGGAU   34 Target Full Sequence	1.5	Sequence 4035 from Patent EP2985353	NA	coding protein	psRNATarget
LQ238035.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|||||||||||*|||||||| targets:11   AGGCCUUGUUCGUUUGUGUCGGAU   34 Target Full Sequence	1.5	Sequence 4030 from Patent EP2985353	NA	coding protein	psRNATarget
HI405907.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|||||||||||*|||||||| targets:11   AGGCCUUGUUCGUUUGUGUCGGAU   34 Target Full Sequence	1.5	Sequence 4032 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238036.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|||||||||||*|||||||| targets:11   AGGCCUUGUUCGUUUGUGUCGGAU   34 Target Full Sequence	1.5	Sequence 4031 from Patent EP2985353	NA	coding protein	psRNATarget
JB166368.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|||||||||||*|||||||| targets:11   AGGCCUUGUUCGUUUGUGUCGGAU   34 Target Full Sequence	1.5	Sequence 4032 from Patent EP2559767	NA	coding protein	psRNATarget
JB166375.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|||||||||||*|||||||| targets:11   AGGCCUUGUUCGUUUGUGUCGGAU   34 Target Full Sequence	1.5	Sequence 4039 from Patent EP2559767	NA	coding protein	psRNATarget
HI405905.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|||||||||||*|||||||| targets:11   AGGCCUUGUUCGUUUGUGUCGGAU   34 Target Full Sequence	1.5	Sequence 4030 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238037.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|||||||||||*|||||||| targets:11   AGGCCUUGUUCGUUUGUGUCGGAU   34 Target Full Sequence	1.5	Sequence 4032 from Patent EP2985353	NA	coding protein	psRNATarget
HI405897.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|||||||||||||*|||||| targets:12   AGGCCUUGUUCGUUUCUAUCGGAU   35 Target Full Sequence	1.5	Sequence 4022 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238027.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|||||||||||||*|||||| targets:12   AGGCCUUGUUCGUUUCUAUCGGAU   35 Target Full Sequence	1.5	Sequence 4022 from Patent EP2985353	NA	coding protein	psRNATarget
JB166358.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|||||||||||||*|||||| targets:12   AGGCCUUGUUCGUUUCUAUCGGAU   35 Target Full Sequence	1.5	Sequence 4022 from Patent EP2559767	NA	coding protein	psRNATarget
EZ056395.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|||||||||||*|||||||| targets:34   AGGCCUUGUUCGUUUGUGUCGGAU   57 Target Full Sequence	1.5	TSA: Zea mays contig57517, mRNA sequence	NA	coding protein	psRNATarget
AY105834.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|||||||||||*|||||||| targets:755   AGGCCUUGUUCGUUUGUGUCGGAU   778 Target Full Sequence	1.5	Zea mays PCO093864 mRNA sequence	NA	coding protein	psRNATarget
XM_008673797.2	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|||||||||||*|||||||| targets:837   AGGCCUUGUUCGUUUGUGUCGGAU   860 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC100278465 (LOC100278465), transcript variant X2, mRNA	NA	coding protein	psRNATarget
NM_001111367.2	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|||||||||||*|||||||| targets:1093   AGGCCUUGUUCGUUUGUGUCGGAU   1116 Target Full Sequence	1.5	Zea mays Ferredoxin-6, chloroplastic (pco072676(750)), mRNA	NA	coding protein	psRNATarget
NM_001177010.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||||||*|||||||*|||||||| targets:1085   AGGUCUUAUUCGUUUGUGUCGGAU   1108 Target Full Sequence	2.5	Zea mays DRE-binding protein 4 (DBP4), mRNA	NA	coding protein	psRNATarget
FJ805752.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||||||*|||||||*|||||||| targets:1085   AGGUCUUAUUCGUUUGUGUCGGAU   1108 Target Full Sequence	2.5	Zea mays DRE-binding protein 4 (DBP4) mRNA, complete cds	NA	coding protein	psRNATarget
BT019200.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|||||||||||*|||||||| targets:941   AGGCCUUGUUCGUUUGUGUCGGAU   964 Target Full Sequence	1.5	Zea mays clone Contig873.F mRNA sequence	NA	coding protein	psRNATarget
BT088026.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|||||||||||*|||||||| targets:1187   AGGCCUUGUUCGUUUGUGUCGGAU   1210 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0366I22 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001196885.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|||||||||||*|||||||| targets:1187   AGGCCUUGUUCGUUUGUGUCGGAU   1210 Target Full Sequence	1.5	Zea mays Protein kinase superfamily protein (LOC100502407), mRNA	NA	coding protein	psRNATarget
XM_008654032.2	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*||||||||||||*||||||| targets:919   AGGCCUUGUUCGUUUCCGUCGGAU   942 Target Full Sequence	1.5	PREDICTED: Zea mays peroxidase 2 (LOC103632211), transcript variant X5, mRNA	NA	coding protein	psRNATarget
BT066418.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|||||||||||||*|||||| targets:1593   AGGCCUUGUUCGUUUCUAUCGGAU   1616 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0124A04 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001175825.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|||||||||||||*|||||| targets:1593   AGGCCUUGUUCGUUUCUAUCGGAU   1616 Target Full Sequence	1.5	Zea mays putative DEAD-box ATP-dependent RNA helicase family protein (LOC100383160), mRNA	NA	coding protein	psRNATarget
BT068430.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|||||||||||*|||||||| targets:453   AGGCCUUGUUCGUUUGUGUCGGAU   476 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0175H08 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008676360.2	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|||||||||||*|||||||| targets:1821   AGGGCUUGUUCGUUUGUGUCGGAU   1844 Target Full Sequence	1.5	PREDICTED: Zea mays protein-O-fucosyltransferase 1 (LOC100281382), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008676377.2	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|||||||||||*|||||||| targets:1895   AGGGCUUGUUCGUUUGUGUCGGAU   1918 Target Full Sequence	1.5	PREDICTED: Zea mays protein-O-fucosyltransferase 1 (LOC100281382), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008676366.2	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|||||||||||*|||||||| targets:1913   AGGGCUUGUUCGUUUGUGUCGGAU   1936 Target Full Sequence	1.5	PREDICTED: Zea mays protein-O-fucosyltransferase 1 (LOC100281382), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_008676374.2	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|||||||||||*|||||||| targets:1989   AGGGCUUGUUCGUUUGUGUCGGAU   2012 Target Full Sequence	1.5	PREDICTED: Zea mays protein-O-fucosyltransferase 1 (LOC100281382), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008649755.2	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*||||||||||||||*||||| targets:894   AGGCCUUGUUCGUUUCUGCCGGAU   917 Target Full Sequence	1.5	PREDICTED: Zea mays alpha/beta-Hydrolases superfamily protein (cl16339_1), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020539029.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*||||||||||||||*||||| targets:1011   AGGCCUUGUUCGUUUCUGCCGGAU   1034 Target Full Sequence	1.5	PREDICTED: Zea mays alpha/beta-Hydrolases superfamily protein (cl16339_1), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008647453.2	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|||||||||||*|||||||| targets:3270   AGGCCUUGUUCGUUUGUGUCGGAU   3293 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103627145 (LOC103627145), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008647452.2	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|||||||||||*|||||||| targets:3258   AGGCCUUGUUCGUUUGUGUCGGAU   3281 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103627145 (LOC103627145), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020539404.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|||||||||||*|||||||| targets:3425   AGGCCUUGUUCGUUUGUGUCGGAU   3448 Target Full Sequence	1.5	PREDICTED: Zea mays Protein kinase superfamily protein (LOC100502407), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_020539406.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|||||||||||*|||||||| targets:3443   AGGCCUUGUUCGUUUGUGUCGGAU   3466 Target Full Sequence	1.5	PREDICTED: Zea mays Protein kinase superfamily protein (LOC100502407), transcript variant X6, mRNA	NA	coding protein	psRNATarget
XM_020539386.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|||||||||||*|||||||| targets:3460   AGGCCUUGUUCGUUUGUGUCGGAU   3483 Target Full Sequence	1.5	PREDICTED: Zea mays Protein kinase superfamily protein (LOC100502407), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020539392.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|||||||||||*|||||||| targets:3478   AGGCCUUGUUCGUUUGUGUCGGAU   3501 Target Full Sequence	1.5	PREDICTED: Zea mays Protein kinase superfamily protein (LOC100502407), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020539417.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|||||||||||*|||||||| targets:3728   AGGCCUUGUUCGUUUGUGUCGGAU   3751 Target Full Sequence	1.5	PREDICTED: Zea mays Protein kinase superfamily protein (LOC100502407), transcript variant X9, mRNA	NA	coding protein	psRNATarget
XM_020538731.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|||||||||||*|||||||| targets:5238   AGGCCUUGUUCGUUUGUGUCGGAU   5261 Target Full Sequence	1.5	PREDICTED: Zea mays UDP-glucose:glycoprotein glucosyltransferase (LOC103627875), mRNA	NA	coding protein	psRNATarget
XM_008654031.2	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*||||||||||||*||||||| targets:6434   AGGCCUUGUUCGUUUCCGUCGGAU   6457 Target Full Sequence	1.5	PREDICTED: Zea mays peroxidase 2 (LOC103632211), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT083852.2	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   =||*|||||||||||*|||||||| targets:353   GGGACUUGUUCGUUUGUGUCGGAU   376 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0047A08 mRNA, complete cds	NA	coding protein	psRNATarget
HI405870.1	ncRNA:23   CCAGAACAAGCAAAGACAGCCUA   1   ||*|||||||||||*|||||||| targets:1   GGCCUUGUUCGUUUGUGUCGGAU   23 Target Full Sequence	1.5	Sequence 3995 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238000.1	ncRNA:23   CCAGAACAAGCAAAGACAGCCUA   1   ||*|||||||||||*|||||||| targets:1   GGCCUUGUUCGUUUGUGUCGGAU   23 Target Full Sequence	1.5	Sequence 3995 from Patent EP2985353	NA	coding protein	psRNATarget
JB166331.1	ncRNA:23   CCAGAACAAGCAAAGACAGCCUA   1   ||*|||||||||||*|||||||| targets:1   GGCCUUGUUCGUUUGUGUCGGAU   23 Target Full Sequence	1.5	Sequence 3995 from Patent EP2559767	NA	coding protein	psRNATarget
LQ241690.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |*|*||||||||||||*||||||| targets:56   AAGCCUUGUUCGUUUCCGUCGGAU   79 Target Full Sequence	1.5	Sequence 7685 from Patent EP2985353	NA	coding protein	psRNATarget
JB170021.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |*|*||||||||||||*||||||| targets:56   AAGCCUUGUUCGUUUCCGUCGGAU   79 Target Full Sequence	1.5	Sequence 7685 from Patent EP2559767	NA	coding protein	psRNATarget
HI409560.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |*|*||||||||||||*||||||| targets:56   AAGCCUUGUUCGUUUCCGUCGGAU   79 Target Full Sequence	1.5	Sequence 7685 from Patent EP2074227	NA	coding protein	psRNATarget
BT017859.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   ||**||||||||||||||*||||| targets:933   AGACCUUGUUCGUUUCUGCCGGAU   956 Target Full Sequence	1.5	Zea mays clone EL01N0511E01.c mRNA sequence	NA	coding protein	psRNATarget
BT035367.1	ncRNA:24   UCCA-------GAACAAGCAAAGACAGCCUA   1   *|||-------|||||||||||*|||||||| targets:1237   CGGUAUUAAACCUUGUUCGUUUGUGUCGGAU   1267 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0057L05 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001138328.1	ncRNA:24   UCCA-------GAACAAGCAAAGACAGCCUA   1   *|||-------|||||||||||*|||||||| targets:1237   CGGUAUUAAACCUUGUUCGUUUGUGUCGGAU   1267 Target Full Sequence	1.5	Zea mays uncharacterized LOC100193173 (LOC100193173), mRNA	NA	coding protein	psRNATarget
XM_020551571.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   ||**||||||||||||||*||||| targets:1222   AGACCUUGUUCGUUUCUGCCGGAU   1245 Target Full Sequence	1.5	PREDICTED: Zea mays protein recA (LOC100282426), transcript variant X2, mRNA	NA	coding protein	psRNATarget
EU972216.1	ncRNA:24   UCCA-------GAACAAGCAAAGACAGCCUA   1   *|||-------|||||||||||*|||||||| targets:1255   CGGUAUUAAACCUUGUUCGUUUGUGUCGGAU   1285 Target Full Sequence	1.5	Zea mays clone 377576 mRNA sequence	NA	coding protein	psRNATarget
BT062375.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   ||**||||||||||||||*||||| targets:1514   AGACCUUGUUCGUUUCUGCCGGAU   1537 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0287P21 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001352179.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   ||**||||||||||||||*||||| targets:1513   AGACCUUGUUCGUUUCUGCCGGAU   1536 Target Full Sequence	1.5	Zea mays protein recA (LOC100282426), mRNA	NA	coding protein	psRNATarget
BT085007.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   ||**||||||||||||||*||||| targets:1513   AGACCUUGUUCGUUUCUGCCGGAU   1536 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0224O05 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008678176.2	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   ||**||||||||||||||*||||| targets:1537   AGACCUUGUUCGUUUCUGCCGGAU   1560 Target Full Sequence	1.5	PREDICTED: Zea mays protein recA (LOC100282426), transcript variant X1, mRNA	NA	coding protein	psRNATarget
LQ238065.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |***|||||||||||*|||||||| targets:6   AAACCUUGUUCGUUUGUGUCGGAU   29 Target Full Sequence	1.5	Sequence 4060 from Patent EP2985353	NA	coding protein	psRNATarget
HI405935.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |***|||||||||||*|||||||| targets:6   AAACCUUGUUCGUUUGUGUCGGAU   29 Target Full Sequence	1.5	Sequence 4060 from Patent EP2074227	NA	coding protein	psRNATarget
JB166396.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |***|||||||||||*|||||||| targets:6   AAACCUUGUUCGUUUGUGUCGGAU   29 Target Full Sequence	1.5	Sequence 4060 from Patent EP2559767	NA	coding protein	psRNATarget
XM_020547654.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   ||**=||||||||||*|||||||| targets:4339   AGACUUUGUUCGUUUGUGUCGGAU   4362 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC100279517 (LOC100279517), transcript variant X1, mRNA	NA	coding protein	psRNATarget
HI406225.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|*||*||||||||||||||* targets:10   AGGGCCUGCUCGUUUCUGUCGGAA   33 Target Full Sequence	3.0	Sequence 4350 from Patent EP2074227	NA	coding protein	psRNATarget
JB166686.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|*||*||||||||||||||* targets:10   AGGGCCUGCUCGUUUCUGUCGGAA   33 Target Full Sequence	3.0	Sequence 4350 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238355.1	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|*||*||||||||||||||* targets:10   AGGGCCUGCUCGUUUCUGUCGGAA   33 Target Full Sequence	3.0	Sequence 4350 from Patent EP2985353	NA	coding protein	psRNATarget
XM_008656389.2	ncRNA:24   UCCAGAACAAGCAAAGACAGCCUA   1   |||*|*||*||||||||||||||* targets:1430   AGGGCCUGCUCGUUUCUGUCGGAA   1453 Target Full Sequence	3.0	PREDICTED: Zea mays putative protein kinase superfamily protein (LOC100273920), transcript variant X2, mRNA	NA	coding protein	psRNATarget