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BaseInfo

ncRNA ID	osa-miRf10478-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	21
Mature sequence(if miRNA)	NA - GCCAUGAGAAGAUGAAGCUGC - NA
Stem-loop(if miRNA)	U    U        A  A            -         UC  UGGU  GUGC GCCAUGAG AG UGAAGCUGCCGG AUGAUCUGA  GC    U  |||| |||||||| || |||||||||||| |||||||||  ||    U  CACG CGGUAUUC UC ACUUCGACGGUC UACUAGACU  CG    G A    -        G  C            G         UU  UAGA
Stem-loop sequence	UGUGCUGCCAUGAGAAGAUGAAGCUGCCGGAUGAUCUGAUCGCUGGUUUGAGAUGCUUUCAGAUCAUGCUGGCAGCUUCACCUGCUUAUGGCGCACA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
CT835245.1	ncRNA:21   CGUCGAAGUAGAAGAGUACCG   1   ||||||||||||||||||||| targets:203   GCAGCUUCAUCUUCUCAUGGC   223 Target Full Sequence	0.0	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN022H07, full insert sequence	NA	coding protein	psRNATarget
XM_015769742.1	ncRNA:21   CGUCGAAGUAGAAGAGUACCG   1   *||*|||=||||||||||||| targets:460   CCAUCUUUAUCUUCUCAUGGC   480 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group far upstream element-binding protein 1 (LOC4328770), mRNA	far upstream element-binding protein 1(LOC4328770)	coding protein	psRNATarget
AK102733.1	ncRNA:21   CGUCGAAGUAGAAGAGUACCG   1   *||*||||||||||||||||= targets:1005   UCAUCUUCAUCUUCUCAUGGU   1025 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA clone:J033106B03, full insert sequence	NA	coding protein	psRNATarget
XM_015789029.1	ncRNA:21   CGUCGAAGUAGAAGAGUACCG   1   *||*||||||||||||||||= targets:1079   UCAUCUUCAUCUUCUCAUGGU   1099 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group putative disease resistance RPP13-like protein 2 (LOC4340226), mRNA	putative disease resistance RPP13-like protein 2(LOC4340226)	coding protein	psRNATarget
XM_015789028.1	ncRNA:21   CGUCGAAGUAGAAGAGUACCG   1   *||*||||||||||||||||= targets:1060   UCAUCUUCAUCUUCUCAUGGU   1080 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group putative disease resistance RPP13-like protein 3 (LOC9268734), transcript variant X2, mRNA	putative disease resistance RPP13-like protein 3(LOC9268734)	coding protein	psRNATarget
XM_015789027.1	ncRNA:21   CGUCGAAGUAGAAGAGUACCG   1   *||*||||||||||||||||= targets:1058   UCAUCUUCAUCUUCUCAUGGU   1078 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group putative disease resistance RPP13-like protein 3 (LOC9268734), transcript variant X1, mRNA	putative disease resistance RPP13-like protein 3(LOC9268734)	coding protein	psRNATarget