ncRNA ID | novel_zma_miR8807 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:270509328-270509437 [-] |
Reference genome | RefGen_v4 |
Source | SRR4237221 |
Length | 24 |
Mature sequence(if miRNA) | 87 - AGUAAUUUGACACAGCUCGCGAGC - 110 |
Stem-loop(if miRNA) |
--     -     CACA           C    A    A    -UUUA            AGUAA UUUGA    GCUCGCGAGCC GAGC AGCC ACUU     GGCUCGUUGC   ||||| |||||    ||||||||||| |||| |||| ||||     |||||||||C   UUAUU GAGCU    CGAGCGCUCGG CUUG UCGG UGAG     CCGAGCGAUG UU     C     ---C           C    C    C    CCGAG          |
Stem-loop sequence | AGUAAUUUGACACAGCUCGCGAGCCCGAGCAAGCCAACUUUUUAGGCUCGUUGCCGUAGCGAGCCGAGCCGAGUCGGCUCGUUCCGGCUCGCGAGCCUCGAGCUUAUUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT065735.1 |
|
1.0 | Zea mays full-length cDNA clone ZM_BFc0052C16 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
EU951769.1 |
|
1.5 | Zea mays clone 998646 mRNA sequence | NA | coding protein | psRNATarget |