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BaseInfo

ncRNA ID novel_zma_miR8804
Species Zea mays
Class miRNA
Genome position Chr1:282393146-282393229 [-]
Reference genome RefGen_v4
Source SRR4237221
Length 24
Mature sequence(if miRNA) 1 - AAUCCCCCUCAAUCCCCAUGGAUU - 24
Stem-loop(if miRNA) --C              A       AAUCCACUACAAGUCAA
   CCAUGGGGAUUGAG GGGAUUG                 A
   |||||||||||||| |||||||
   GGUACCCCUAACUC CCCUAAC                 A
UUA              C       CCCACCUAACUCCCCCU
Stem-loop sequence CCCAUGGGGAUUGAGAGGGAUUGAAUCCACUACAAGUCAAAAUCCCCCUCAAUCCACCCCAAUCCCCCUCAAUCCCCAUGGAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020546944.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||||||||||||||||||
targets:602   AAUCCAUGGGGAUUGAGGGGGAUU   625

0.0 PREDICTED: Zea mays cytochrome b5-like (LOC109943550), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020546943.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||||||||||||||||||
targets:659   AAUCCAUGGGGAUUGAGGGGGAUU   682

0.0 PREDICTED: Zea mays cytochrome b5-like (LOC109943550), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020547439.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  |||||||||||||||||*||||||
targets:3867   AAUCCAUGGGGAUUGAGAGGGAUU   3890

1.5 PREDICTED: Zea mays hypothetical protein (LOC100194067), transcript variant X1, mRNA NA coding protein psRNATarget
HI409880.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||*||||*||||||||||||||||
targets:7   AAACCAUAGGGAUUGAGGGGGAUU   30

1.0 Sequence 8005 from Patent EP2074227 NA coding protein psRNATarget
JB170341.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||*||||*||||||||||||||||
targets:7   AAACCAUAGGGAUUGAGGGGGAUU   30

1.0 Sequence 8005 from Patent EP2559767 NA coding protein psRNATarget
LQ242010.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||*||||*||||||||||||||||
targets:7   AAACCAUAGGGAUUGAGGGGGAUU   30

1.0 Sequence 8005 from Patent EP2985353 NA coding protein psRNATarget
LQ235464.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:9   AAUCCAUGUGGAUUGAGUGGGAUU   32

2.5 Sequence 1459 from Patent EP2985353 NA coding protein psRNATarget
JB163795.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:9   AAUCCAUGUGGAUUGAGUGGGAUU   32

2.5 Sequence 1459 from Patent EP2559767 NA coding protein psRNATarget
HI403334.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:9   AAUCCAUGUGGAUUGAGUGGGAUU   32

2.5 Sequence 1459 from Patent EP2074227 NA coding protein psRNATarget
JB167799.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||*||||*||||||||||||||||
targets:13   AAACCAUAGGGAUUGAGGGGGAUU   36

1.0 Sequence 5463 from Patent EP2559767 NA coding protein psRNATarget
LQ239468.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||*||||*||||||||||||||||
targets:13   AAACCAUAGGGAUUGAGGGGGAUU   36

1.0 Sequence 5463 from Patent EP2985353 NA coding protein psRNATarget
HI407338.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||*||||*||||||||||||||||
targets:13   AAACCAUAGGGAUUGAGGGGGAUU   36

1.0 Sequence 5463 from Patent EP2074227 NA coding protein psRNATarget
JB163796.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:9   AAUCCAUGUGGAUUGAGUGGGAUU   32

2.5 Sequence 1460 from Patent EP2559767 NA coding protein psRNATarget
HI403335.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:9   AAUCCAUGUGGAUUGAGUGGGAUU   32

2.5 Sequence 1460 from Patent EP2074227 NA coding protein psRNATarget
JB163754.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:9   AAUCCAUGUGGAUUGAGUGGGAUU   32

2.5 Sequence 1418 from Patent EP2559767 NA coding protein psRNATarget
LQ235423.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:9   AAUCCAUGUGGAUUGAGUGGGAUU   32

2.5 Sequence 1418 from Patent EP2985353 NA coding protein psRNATarget
LQ235465.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:9   AAUCCAUGUGGAUUGAGUGGGAUU   32

2.5 Sequence 1460 from Patent EP2985353 NA coding protein psRNATarget
HI403293.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:9   AAUCCAUGUGGAUUGAGUGGGAUU   32

2.5 Sequence 1418 from Patent EP2074227 NA coding protein psRNATarget
JB166349.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:12   AAUCCAUGUGGAUUGAGUGGGAUU   35

2.5 Sequence 4013 from Patent EP2559767 NA coding protein psRNATarget
LQ238028.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:12   AAUCCAUGUGGAUUGAGCGGGAUU   35

2.5 Sequence 4023 from Patent EP2985353 NA coding protein psRNATarget
HI405892.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:12   AAUCCAUGUGGAUUGAGCGGGAUU   35

2.5 Sequence 4017 from Patent EP2074227 NA coding protein psRNATarget
LQ238022.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:12   AAUCCAUGUGGAUUGAGCGGGAUU   35

2.5 Sequence 4017 from Patent EP2985353 NA coding protein psRNATarget
LQ238018.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:12   AAUCCAUGUGGAUUGAGUGGGAUU   35

2.5 Sequence 4013 from Patent EP2985353 NA coding protein psRNATarget
JB166353.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:12   AAUCCAUGUGGAUUGAGCGGGAUU   35

2.5 Sequence 4017 from Patent EP2559767 NA coding protein psRNATarget
LQ238030.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:12   AAUCCAUGUGGAUUGAGCGGGAUU   35

2.5 Sequence 4025 from Patent EP2985353 NA coding protein psRNATarget
LQ238024.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:12   AAUCCAUGUGGAUUGAGCGGGAUU   35

2.5 Sequence 4019 from Patent EP2985353 NA coding protein psRNATarget
LQ238021.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:12   AAUCCAUGUGGAUUGAGCGGGAUU   35

2.5 Sequence 4016 from Patent EP2985353 NA coding protein psRNATarget
HI405891.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:12   AAUCCAUGUGGAUUGAGCGGGAUU   35

2.5 Sequence 4016 from Patent EP2074227 NA coding protein psRNATarget
JB166355.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:12   AAUCCAUGUGGAUUGAGCGGGAUU   35

2.5 Sequence 4019 from Patent EP2559767 NA coding protein psRNATarget
HI405900.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:12   AAUCCAUGUGGAUUGAGCGGGAUU   35

2.5 Sequence 4025 from Patent EP2074227 NA coding protein psRNATarget
JB166361.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:12   AAUCCAUGUGGAUUGAGCGGGAUU   35

2.5 Sequence 4025 from Patent EP2559767 NA coding protein psRNATarget
HI405888.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:12   AAUCCAUGUGGAUUGAGUGGGAUU   35

2.5 Sequence 4013 from Patent EP2074227 NA coding protein psRNATarget
HI405895.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:12   AAUCCAUGUGGAUUGAGUGGGAUU   35

2.5 Sequence 4020 from Patent EP2074227 NA coding protein psRNATarget
HI405898.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:12   AAUCCAUGUGGAUUGAGCGGGAUU   35

2.5 Sequence 4023 from Patent EP2074227 NA coding protein psRNATarget
JB166356.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:12   AAUCCAUGUGGAUUGAGUGGGAUU   35

2.5 Sequence 4020 from Patent EP2559767 NA coding protein psRNATarget
LQ238025.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:12   AAUCCAUGUGGAUUGAGUGGGAUU   35

2.5 Sequence 4020 from Patent EP2985353 NA coding protein psRNATarget
JB166352.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:12   AAUCCAUGUGGAUUGAGCGGGAUU   35

2.5 Sequence 4016 from Patent EP2559767 NA coding protein psRNATarget
JB166359.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:12   AAUCCAUGUGGAUUGAGCGGGAUU   35

2.5 Sequence 4023 from Patent EP2559767 NA coding protein psRNATarget
HI405894.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:12   AAUCCAUGUGGAUUGAGCGGGAUU   35

2.5 Sequence 4019 from Patent EP2074227 NA coding protein psRNATarget
LQ237957.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:19   AAUCCAUGUGGAUUGAGUGGGAUU   42

2.5 Sequence 3952 from Patent EP2985353 NA coding protein psRNATarget
HI405827.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:19   AAUCCAUGUGGAUUGAGUGGGAUU   42

2.5 Sequence 3952 from Patent EP2074227 NA coding protein psRNATarget
JB166288.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:19   AAUCCAUGUGGAUUGAGUGGGAUU   42

2.5 Sequence 3952 from Patent EP2559767 NA coding protein psRNATarget
JB166305.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

2.5 Sequence 3969 from Patent EP2559767 NA coding protein psRNATarget
JB166298.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

2.5 Sequence 3962 from Patent EP2559767 NA coding protein psRNATarget
LQ237974.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

2.5 Sequence 3969 from Patent EP2985353 NA coding protein psRNATarget
HI405844.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

2.5 Sequence 3969 from Patent EP2074227 NA coding protein psRNATarget
HI405837.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

2.5 Sequence 3962 from Patent EP2074227 NA coding protein psRNATarget
LQ237967.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

2.5 Sequence 3962 from Patent EP2985353 NA coding protein psRNATarget
HI405835.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

2.5 Sequence 3960 from Patent EP2074227 NA coding protein psRNATarget
LQ237965.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

2.5 Sequence 3960 from Patent EP2985353 NA coding protein psRNATarget
JB166312.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

2.5 Sequence 3976 from Patent EP2559767 NA coding protein psRNATarget
HI405823.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

2.5 Sequence 3948 from Patent EP2074227 NA coding protein psRNATarget
JB166284.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

2.5 Sequence 3948 from Patent EP2559767 NA coding protein psRNATarget
JB166306.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

2.5 Sequence 3970 from Patent EP2559767 NA coding protein psRNATarget
HI405881.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:23   AAUCCAUGUGGAUUGAGCGGGAUU   46

2.5 Sequence 4006 from Patent EP2074227 NA coding protein psRNATarget
LQ237951.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

2.5 Sequence 3946 from Patent EP2985353 NA coding protein psRNATarget
LQ237953.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

2.5 Sequence 3948 from Patent EP2985353 NA coding protein psRNATarget
HI405845.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

2.5 Sequence 3970 from Patent EP2074227 NA coding protein psRNATarget
HI405825.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

2.5 Sequence 3950 from Patent EP2074227 NA coding protein psRNATarget
HI405851.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

2.5 Sequence 3976 from Patent EP2074227 NA coding protein psRNATarget
LQ238011.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:23   AAUCCAUGUGGAUUGAGCGGGAUU   46

2.5 Sequence 4006 from Patent EP2985353 NA coding protein psRNATarget
HI405821.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

2.5 Sequence 3946 from Patent EP2074227 NA coding protein psRNATarget
JB166309.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

2.5 Sequence 3973 from Patent EP2559767 NA coding protein psRNATarget
JB166296.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

2.5 Sequence 3960 from Patent EP2559767 NA coding protein psRNATarget
HI405848.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

2.5 Sequence 3973 from Patent EP2074227 NA coding protein psRNATarget
LQ237981.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

2.5 Sequence 3976 from Patent EP2985353 NA coding protein psRNATarget
LQ237978.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

2.5 Sequence 3973 from Patent EP2985353 NA coding protein psRNATarget
LQ237955.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

2.5 Sequence 3950 from Patent EP2985353 NA coding protein psRNATarget
LQ237975.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

2.5 Sequence 3970 from Patent EP2985353 NA coding protein psRNATarget
JB166286.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

2.5 Sequence 3950 from Patent EP2559767 NA coding protein psRNATarget
JB166342.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:23   AAUCCAUGUGGAUUGAGCGGGAUU   46

2.5 Sequence 4006 from Patent EP2559767 NA coding protein psRNATarget
JB166282.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

2.5 Sequence 3946 from Patent EP2559767 NA coding protein psRNATarget
HI405829.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

2.5 Sequence 3954 from Patent EP2074227 NA coding protein psRNATarget
LQ237959.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

2.5 Sequence 3954 from Patent EP2985353 NA coding protein psRNATarget
HI405833.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

2.5 Sequence 3958 from Patent EP2074227 NA coding protein psRNATarget
LQ237963.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

2.5 Sequence 3958 from Patent EP2985353 NA coding protein psRNATarget
JB166294.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

2.5 Sequence 3958 from Patent EP2559767 NA coding protein psRNATarget
JB166290.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

2.5 Sequence 3954 from Patent EP2559767 NA coding protein psRNATarget
EZ107685.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:22   AAUCCAUGUGGAUUGAGUGGGAUU   45

2.5 TSA: Zea mays contig43343, mRNA sequence NA coding protein psRNATarget
LQ235117.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:32   AAUCCAUGUGGAUUGAGUGGGAUU   55

2.5 Sequence 1112 from Patent EP2985353 NA coding protein psRNATarget
JB163448.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:32   AAUCCAUGUGGAUUGAGUGGGAUU   55

2.5 Sequence 1112 from Patent EP2559767 NA coding protein psRNATarget
HI402987.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:32   AAUCCAUGUGGAUUGAGUGGGAUU   55

2.5 Sequence 1112 from Patent EP2074227 NA coding protein psRNATarget
JB163553.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:32   AAUCCAUGUGGAUUGAGUGGGAUU   55

2.5 Sequence 1217 from Patent EP2559767 NA coding protein psRNATarget
HI403092.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:32   AAUCCAUGUGGAUUGAGUGGGAUU   55

2.5 Sequence 1217 from Patent EP2074227 NA coding protein psRNATarget
LQ235222.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:32   AAUCCAUGUGGAUUGAGUGGGAUU   55

2.5 Sequence 1217 from Patent EP2985353 NA coding protein psRNATarget
HI405822.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

2.5 Sequence 3947 from Patent EP2074227 NA coding protein psRNATarget
HI405822.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:163   AAUCCAUGUGGAUUGAGUGGGAUU   186

2.5 Sequence 3947 from Patent EP2074227 NA coding protein psRNATarget
LQ237952.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

2.5 Sequence 3947 from Patent EP2985353 NA coding protein psRNATarget
LQ237952.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:163   AAUCCAUGUGGAUUGAGUGGGAUU   186

2.5 Sequence 3947 from Patent EP2985353 NA coding protein psRNATarget
JB166283.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

2.5 Sequence 3947 from Patent EP2559767 NA coding protein psRNATarget
JB166283.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:163   AAUCCAUGUGGAUUGAGUGGGAUU   186

2.5 Sequence 3947 from Patent EP2559767 NA coding protein psRNATarget
EU944907.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:272   AAUCCAUGUGGAUUGAGUGGGAUU   295

2.5 Zea mays clone 235115 mRNA sequence NA coding protein psRNATarget
EU968099.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:156   AAUCCAUGUGGAUUGAGUGGGAUU   179

2.5 Zea mays clone 314232 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
NM_001348011.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  |||||||**|||||||||||||||
targets:375   AAUCCAUAUGGAUUGAGGGGGAUU   398

2.0 Zea mays hypothetical protein (LOC100277538), mRNA NA coding protein psRNATarget
AY111036.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:106   AAUCCAUGUGGAUUGAGUGGGAUU   129

2.5 Zea mays CL1582_4 mRNA sequence NA coding protein psRNATarget
AY112156.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:82   AAUCCAUGUGGAUUGAGUGGGAUU   105

2.5 Zea mays CL1582_10 mRNA sequence NA coding protein psRNATarget
EU972046.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  |||||||**|||||||||||||||
targets:714   AAUCCAUAUGGAUUGAGGGGGAUU   737

2.0 Zea mays clone 373861 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
BT061688.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:918   AAUCCAUGUGGAUUGAGUGGGAUU   941

2.5 Zea mays full-length cDNA clone ZM_BFb0175E10 mRNA, complete cds NA coding protein psRNATarget
AY105812.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:969   AAUCCAUGUGGAUUGAGUGGGAUU   992

2.5 Zea mays PCO140232 mRNA sequence NA coding protein psRNATarget
BT018093.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:1084   AAUCCAUGUGGAUUGAGUGGGAUU   1107

2.5 Zea mays clone EL01N0552E08.c mRNA sequence NA coding protein psRNATarget
BT018247.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:391   AAUCCAUGUGGAUUGAGCGGGAUU   414

2.5 Zea mays clone EL01N0563E06.c mRNA sequence NA coding protein psRNATarget
BT018592.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:1028   AAUCCAUGUGGAUUGAGUGGGAUU   1051

2.5 Zea mays clone EL01N0447E06.d mRNA sequence NA coding protein psRNATarget
BT017852.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:870   AAUCCAUGUGGAUUGAGUGGGAUU   893

2.5 Zea mays clone EL01N0511C01.c mRNA sequence NA coding protein psRNATarget
EU960828.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:927   AAUCCAUGUGGAUUGAGUGGGAUU   950

2.5 Zea mays clone 228913 exosome complex exonuclease RRP41 mRNA, complete cds NA coding protein psRNATarget
BT068791.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:1276   AAUCCAUGUGGAUUGAGCGGGAUU   1299

2.5 Zea mays full-length cDNA clone ZM_BFb0382D13 mRNA, complete cds NA coding protein psRNATarget
NM_001154990.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||*||||*||||||||||||||||
targets:1182   AAACCAUAGGGAUUGAGGGGGAUU   1205

1.0 Zea mays CTD small phosphatase-like protein (cl28155_-2), mRNA NA coding protein psRNATarget
EU959460.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||*||||*||||||||||||||||
targets:1182   AAACCAUAGGGAUUGAGGGGGAUU   1205

1.0 Zea mays clone 218223 CTD small phosphatase-like protein mRNA, complete cds NA coding protein psRNATarget
XM_020548080.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  |||||||**|||||||||||||||
targets:977   AAUCCAUAUGGAUUGAGGGGGAUU   1000

2.0 PREDICTED: Zea mays translation initiation factor IF-2-like (LOC109943947), mRNA NA coding protein psRNATarget
BT055467.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  |||||||**|||||||||||||||
targets:1015   AAUCCAUAUGGAUUGAGGGGGAUU   1038

2.0 Zea mays full-length cDNA clone ZM_BFb0279E03 mRNA, complete cds NA coding protein psRNATarget
BT086570.2
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:147   AAUCCAUGUGGAUUGAGUGGGAUU   170

2.5 Zea mays full-length cDNA clone ZM_BFc0184M19 mRNA, complete cds NA coding protein psRNATarget
BT062563.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:1222   AAUCCAUGUGGAUUGAGCGGGAUU   1245

2.5 Zea mays full-length cDNA clone ZM_BFb0314E20 mRNA, complete cds NA coding protein psRNATarget
NM_001174684.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:1222   AAUCCAUGUGGAUUGAGCGGGAUU   1245

2.5 Zea mays Elongation factor G-1 mitochondrial (pco134899), mRNA NA coding protein psRNATarget
EU966790.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:1405   AAUCCAUGUGGAUUGAGUGGGAUU   1428

2.5 Zea mays clone 297432 pyruvate dehydrogenase E1 component alpha subunit mRNA, complete cds NA coding protein psRNATarget
EU962948.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:1405   AAUCCAUGUGGAUUGAGUGGGAUU   1428

2.5 Zea mays clone 246807 pyruvate dehydrogenase E1 component alpha subunit mRNA, complete cds NA coding protein psRNATarget
EU966290.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:1449   AAUCCAUGUGGAUUGAGUGGGAUU   1472

2.5 Zea mays clone 293206 pyruvate dehydrogenase E1 component alpha subunit mRNA, complete cds NA coding protein psRNATarget
NM_001156787.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:1449   AAUCCAUGUGGAUUGAGUGGGAUU   1472

2.5 Zea mays pyruvate dehydrogenase E1 component alpha subunit (LOC100283889), mRNA NA coding protein psRNATarget
BT066364.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:1454   AAUCCAUGUGGAUUGAGUGGGAUU   1477

2.5 Zea mays full-length cDNA clone ZM_BFc0009H06 mRNA, complete cds NA coding protein psRNATarget
NM_001175812.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:1454   AAUCCAUGUGGAUUGAGUGGGAUU   1477

2.5 Zea mays uncharacterized LOC100383146 (LOC100383146), mRNA NA coding protein psRNATarget
BT064472.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  |||||||*|||||||||||||*||
targets:1361   AAUCCAUAGGGAUUGAGGGGGUUU   1384

2.5 Zea mays full-length cDNA clone ZM_BFc0172D22 mRNA, complete cds NA coding protein psRNATarget
BT040193.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  |||||||*|||||||||||||*||
targets:1405   AAUCCAUAGGGAUUGAGGGGGUUU   1428

2.5 Zea mays full-length cDNA clone ZM_BFc0070L08 mRNA, complete cds NA coding protein psRNATarget
AY105910.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  |||||||*|||||||||||||*||
targets:1423   AAUCCAUAGGGAUUGAGGGGGUUU   1446

2.5 Zea mays PCO106969 mRNA sequence NA coding protein psRNATarget
AY103588.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:1423   AAUCCAUGUGGAUUGAGUGGGAUU   1446

2.5 Zea mays PCO114222 mRNA sequence NA coding protein psRNATarget
NM_001148011.2
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  |||||||*|||||||||||||*||
targets:1437   AAUCCAUAGGGAUUGAGGGGGUUU   1460

2.5 Zea mays uncharacterized LOC100273594 (AY105910), mRNA NA coding protein psRNATarget
BT041454.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  |||||||*|||||||||||||*||
targets:1437   AAUCCAUAGGGAUUGAGGGGGUUU   1460

2.5 Zea mays full-length cDNA clone ZM_BFc0061I22 mRNA, complete cds NA coding protein psRNATarget
EU964623.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:1446   AAUCCAUGUGGAUUGAGUGGGAUU   1469

2.5 Zea mays clone 280415 sorting nexin 1 mRNA, complete cds NA coding protein psRNATarget
XM_008669845.2
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:1729   AAUCCAUGUGGAUUGAGCGGGAUU   1752

2.5 PREDICTED: Zea mays BcpLH protein (cl15365_1), transcript variant X1, mRNA NA coding protein psRNATarget
BT018572.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:1770   AAUCCAUGUGGAUUGAGUGGGAUU   1793

2.5 Zea mays clone EL01N0443D02.d mRNA sequence NA coding protein psRNATarget
EU956568.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  |||||||**|||||||||||||||
targets:1560   AAUCCAUAUGGAUUGAGGGGGAUU   1583

2.0 Zea mays clone 1566799 mRNA sequence NA coding protein psRNATarget
XM_008651215.2
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:388   AAUCCAUGUGGAUUGAGUGGGAUU   411

2.5 PREDICTED: Zea mays putative domain of unknown function (DUF641) containing family protein (LOC103630129), mRNA NA coding protein psRNATarget
XM_020539702.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:2485   AAUCCAUGUGGAUUGAGCGGGAUU   2508

2.5 PREDICTED: Zea mays receptor kinase-like protein Xa21 (LOC103628995), mRNA NA coding protein psRNATarget
XM_008645434.2
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:2465   AAUCCAUGUGGAUUGAGCGGGAUU   2488

2.5 PREDICTED: Zea mays Elongation factor G-1 mitochondrial (pco134899), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020537815.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||*||||*||||||||||||||||
targets:2543   AAACCAUAGGGAUUGAGGGGGAUU   2566

1.0 PREDICTED: Zea mays uncharacterized protein DDB_G0284459 (LOC103627942), mRNA NA coding protein psRNATarget
XM_020550022.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:3617   AAUCCAUGUGGAUUGAGUGGGAUU   3640

2.5 PREDICTED: Zea mays serine/threonine-protein kinase prpf4B-like (LOC103650321), transcript variant X8, mRNA NA coding protein psRNATarget
XM_020550024.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:3641   AAUCCAUGUGGAUUGAGUGGGAUU   3664

2.5 PREDICTED: Zea mays serine/threonine-protein kinase prpf4B-like (LOC103650321), transcript variant X10, mRNA NA coding protein psRNATarget
XM_020550021.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:3695   AAUCCAUGUGGAUUGAGUGGGAUU   3718

2.5 PREDICTED: Zea mays serine/threonine-protein kinase prpf4B-like (LOC103650321), transcript variant X7, mRNA NA coding protein psRNATarget
XM_020550020.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:3689   AAUCCAUGUGGAUUGAGUGGGAUU   3712

2.5 PREDICTED: Zea mays serine/threonine-protein kinase prpf4B-like (LOC103650321), transcript variant X6, mRNA NA coding protein psRNATarget
XM_020550017.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:3697   AAUCCAUGUGGAUUGAGUGGGAUU   3720

2.5 PREDICTED: Zea mays serine/threonine-protein kinase prpf4B-like (LOC103650321), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020550019.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:3684   AAUCCAUGUGGAUUGAGUGGGAUU   3707

2.5 PREDICTED: Zea mays serine/threonine-protein kinase prpf4B-like (LOC103650321), transcript variant X5, mRNA NA coding protein psRNATarget
XM_020550016.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:3759   AAUCCAUGUGGAUUGAGUGGGAUU   3782

2.5 PREDICTED: Zea mays serine/threonine-protein kinase prpf4B-like (LOC103650321), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020551710.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:3242   AAUCCAUGUGGAUUGAGUGGGAUU   3265

2.5 PREDICTED: Zea mays hypothetical protein (LOC100384203), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020550018.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:4083   AAUCCAUGUGGAUUGAGUGGGAUU   4106

2.5 PREDICTED: Zea mays serine/threonine-protein kinase prpf4B-like (LOC103650321), transcript variant X4, mRNA NA coding protein psRNATarget
XM_020550015.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:4179   AAUCCAUGUGGAUUGAGUGGGAUU   4202

2.5 PREDICTED: Zea mays serine/threonine-protein kinase prpf4B-like (LOC103650321), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020551708.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:4877   AAUCCAUGUGGAUUGAGUGGGAUU   4900

2.5 PREDICTED: Zea mays hypothetical protein (LOC100384203), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008676887.2
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||||||||*||||||||*||||||
targets:2574   AAUCCAUGUGGAUUGAGUGGGAUU   2597

2.5 PREDICTED: Zea mays lectin-like receptor kinase 7 (LOC100281599), transcript variant X1, mRNA NA coding protein psRNATarget
JB166337.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  |||=||||*||||||||*||||||
targets:21   AAUUCAUGUGGAUUGAGUGGGAUU   44

2.5 Sequence 4001 from Patent EP2559767 NA coding protein psRNATarget
HI405876.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  |||=||||*||||||||*||||||
targets:21   AAUUCAUGUGGAUUGAGUGGGAUU   44

2.5 Sequence 4001 from Patent EP2074227 NA coding protein psRNATarget
LQ238006.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  |||=||||*||||||||*||||||
targets:21   AAUUCAUGUGGAUUGAGUGGGAUU   44

2.5 Sequence 4001 from Patent EP2985353 NA coding protein psRNATarget
EU946745.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  |=||||||*||||||||*||||||
targets:482   AGUCCAUGUGGAUUGAGUGGGAUU   505

2.5 Zea mays clone 323251 mRNA sequence NA coding protein psRNATarget
LQ239015.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||*||||*||||||||||*|||||
targets:9   AAACCAUAGGGAUUGAGGUGGAUU   32

2.5 Sequence 5010 from Patent EP2985353 NA coding protein psRNATarget
JB167346.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||*||||*||||||||||*|||||
targets:9   AAACCAUAGGGAUUGAGGUGGAUU   32

2.5 Sequence 5010 from Patent EP2559767 NA coding protein psRNATarget
HI406885.1
ncRNA:24   UUAGGUACCCCUAACUCCCCCUAA   1
  ||*||||*||||||||||*|||||
targets:9   AAACCAUAGGGAUUGAGGUGGAUU   32

2.5 Sequence 5010 from Patent EP2074227 NA coding protein psRNATarget
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