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BaseInfo

ncRNA ID osa-miRf10477-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 23
Mature sequence(if miRNA) NA - GCAGCUUCAUCUUCUCAUGGCAG - NA
Stem-loop(if miRNA) U    -     A  C             A C         AA  AUCU
 GUGC GCCAU AG AGGUGAAGCUGCC G AUGAUCUGA  GC    C
 |||| ||||| || ||||||||||||| | |||||||||  ||    A
 CACG CGGUA UC UCUACUUCGACGG C UACUAGACU  CG    A
A    A     C  U             C -         AG  ACCA
Stem-loop sequence UGUGCGCCAUAAGCAGGUGAAGCUGCCAGCAUGAUCUGAAAGCAUCUCAAACCAGCGAUCAGAUCAUCCGGCAGCUUCAUCUUCUCAUGGCAGCACA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK060714.1
ncRNA:23   GAC-GGUACUCUUCUACUUCGACG   1
  *||-|||*||||||||||||||||
targets:1239   AUGACCACGAGAAGAUGAAGCUGC   1262

1.0 Oryza sativa Japonica Group cDNA clone:001-031-D01, full insert sequence NA coding protein psRNATarget
AK099350.1
ncRNA:23   GAC-GGUACUCUUCUACUUCGACG   1
  *||-|||*||||||||||||||||
targets:1240   AUGACCACGAGAAGAUGAAGCUGC   1263

1.0 Oryza sativa Japonica Group cDNA clone:J033030O19, full insert sequence NA coding protein psRNATarget
AK060666.1
ncRNA:23   GAC-GGUACUCUUCUACUUCGACG   1
  *||-|||*||||||||||||||||
targets:1239   AUGACCACGAGAAGAUGAAGCUGC   1262

1.0 Oryza sativa Japonica Group cDNA clone:001-028-C12, full insert sequence NA coding protein psRNATarget
XM_015793860.1
ncRNA:23   GAC-GGUACUCUUCUACUUCGACG   1
  *||-|||*||||||||||||||||
targets:1248   AUGACCACGAGAAGAUGAAGCUGC   1271

1.0 PREDICTED: Oryza sativa Japonica Group gibberellin 2-beta-dioxygenase (LOC4325145), mRNA gibberellin 2-beta-dioxygenase(LOC4325145) coding protein psRNATarget
AK101713.1
ncRNA:23   GAC-GGUACUCUUCUACUUCGACG   1
  *||-|||*||||||||||||||||
targets:1240   AUGACCACGAGAAGAUGAAGCUGC   1263

1.0 Oryza sativa Japonica Group cDNA clone:J033060N07, full insert sequence NA coding protein psRNATarget