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BaseInfo

ncRNA ID	novel_zma_miR8792
Species	Zea mays
Class	miRNA
Genome position	Chr9:80764882-80764942 [+]
Reference genome	RefGen_v4
Source	SRR4237221
Length	24
Mature sequence(if miRNA)	1 - GCACCGGACUGUCCAGUGUGACAC - 24
Stem-loop(if miRNA)	--         U    A    G    C  A   GCACCGGAC GUCC GUGU ACAC GG C   ||||||||| |||| |||| |||| || U   CGUGGCCUG CAGG CACA UGUG CC U AC         U    C    G    U  U
Stem-loop sequence	GCACCGGACUGUCCAGUGUGACACCGGACUUUCCUGUGUGACACCGGACUGUCCGGUGCCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ241219.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |||*|=|||||||||||||||||| targets:67   GUGGCGCACUGGACAGUCCGGUGC   90 Target Full Sequence	1.0	Sequence 7214 from Patent EP2985353	NA	coding protein	psRNATarget
JB169550.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |||*|=|||||||||||||||||| targets:67   GUGGCGCACUGGACAGUCCGGUGC   90 Target Full Sequence	1.0	Sequence 7214 from Patent EP2559767	NA	coding protein	psRNATarget
HI409089.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |||*|=|||||||||||||||||| targets:67   GUGGCGCACUGGACAGUCCGGUGC   90 Target Full Sequence	1.0	Sequence 7214 from Patent EP2074227	NA	coding protein	psRNATarget
NM_001174416.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |||||||||*|||||||=|||||| targets:716   GUGUCACACCGGACAGUUCGGUGC   739 Target Full Sequence	2.5	Zea mays uncharacterized LOC100381596 (LOC100381596), mRNA	NA	coding protein	psRNATarget
NM_001174416.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   *||*==|||*|||||||||||||* targets:823   CUGGUGCACCGGACAGUCCGGUGA   846 Target Full Sequence	3.0	Zea mays uncharacterized LOC100381596 (LOC100381596), mRNA	NA	coding protein	psRNATarget
BT061709.2	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |||||||||*|||||||=|||||| targets:716   GUGUCACACCGGACAGUUCGGUGC   739 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0176K17 mRNA, complete cds	NA	coding protein	psRNATarget
BT061709.2	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   *||*==|||*|||||||||||||* targets:823   CUGGUGCACCGGACAGUCCGGUGA   846 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFb0176K17 mRNA, complete cds	NA	coding protein	psRNATarget
EU940974.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |||-|||||||||||||||||||| targets:2657   GUG-CACACUGGACAGUCCGGUGC   2679 Target Full Sequence	0.0	Zea mays clone 1225259 mRNA sequence	NA	coding protein	psRNATarget
EU940974.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   *||*|=|||*|||||||||||||| targets:2540   CUGGCGCACCGGACAGUCCGGUGC   2563 Target Full Sequence	2.0	Zea mays clone 1225259 mRNA sequence	NA	coding protein	psRNATarget
BT061123.2	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   *||*|||||||||||||||||||| targets:265   UUGGCACACUGGACAGUCCGGUGC   288 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0108I22 mRNA, complete cds	NA	coding protein	psRNATarget
BT061123.2	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |||*|*|||*|||||||||||||| targets:355   GUGCCUCACCGGACAGUCCGGUGC   378 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0108I22 mRNA, complete cds	NA	coding protein	psRNATarget
BT061123.2	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |***|||||*|||||||||||||| targets:284   GGUGCACACCGGACAGUCCGGUGC   307 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0108I22 mRNA, complete cds	NA	coding protein	psRNATarget
BT086229.2	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |||-|||||||||||||||||||= targets:535   GUG-CACACUGGACAGUCCGGUGU   557 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFc0134M03 mRNA, complete cds	NA	coding protein	psRNATarget
BT086229.2	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   *||*==|||*|||||||||||||= targets:830   CUGGUGCACCGGACAGUCCGGUGU   853 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFc0134M03 mRNA, complete cds	NA	coding protein	psRNATarget
EZ106959.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |||*|||||*|||||||||||||| targets:96   GUGGCACACCGGACAGUCCGGUGC   119 Target Full Sequence	1.0	TSA: Zea mays contig42617, mRNA sequence	NA	coding protein	psRNATarget
BT083610.2	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |||*|||||*|||||||||||||| targets:799   GUGGCACACCGGACAGUCCGGUGC   822 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0019A02 mRNA, complete cds	NA	coding protein	psRNATarget
BT083610.2	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   *||*|=|||*|||||||||||||| targets:475   AUGGCGCACCGGACAGUCCGGUGC   498 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0019A02 mRNA, complete cds	NA	coding protein	psRNATarget
BT083610.2	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   *||*|||||*|||||||||||||* targets:697   CUGGCACACCGGACAGUCCGGUGA   720 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0019A02 mRNA, complete cds	NA	coding protein	psRNATarget
EU940845.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |||*|||||*|||||||||||||| targets:1381   GUGGCACACCGGACAGUCCGGUGC   1404 Target Full Sequence	1.0	Zea mays clone 1163633 mRNA sequence	NA	coding protein	psRNATarget
EU940845.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |||*|*|||*|||||||||||||| targets:1471   GUGCCUCACCGGACAGUCCGGUGC   1494 Target Full Sequence	2.0	Zea mays clone 1163633 mRNA sequence	NA	coding protein	psRNATarget
EU940845.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |***|||||*|||||||||||||| targets:1400   GGUGCACACCGGACAGUCCGGUGC   1423 Target Full Sequence	1.0	Zea mays clone 1163633 mRNA sequence	NA	coding protein	psRNATarget
HI409351.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   ||||-||||*|||||||||||||| targets:32   GUGU-ACACCGGACAGUCCGGUGC   54 Target Full Sequence	1.0	Sequence 7476 from Patent EP2074227	NA	coding protein	psRNATarget
JB169812.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   ||||-||||*|||||||||||||| targets:32   GUGU-ACACCGGACAGUCCGGUGC   54 Target Full Sequence	1.0	Sequence 7476 from Patent EP2559767	NA	coding protein	psRNATarget
LQ241481.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   ||||-||||*|||||||||||||| targets:32   GUGU-ACACCGGACAGUCCGGUGC   54 Target Full Sequence	1.0	Sequence 7476 from Patent EP2985353	NA	coding protein	psRNATarget
BT068112.2	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |||-|||||*|||||||||||||| targets:472   GUG-CACACCGGACAGUCCGGUGC   494 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0045K13 mRNA, complete cds	NA	coding protein	psRNATarget
BT068112.2	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   *||*|=|||*|||||||||||||| targets:376   CUGGCGCACCGGACAGUCCGGUGC   399 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0045K13 mRNA, complete cds	NA	coding protein	psRNATarget
BT068112.2	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |||-|||||*|||||||||||||* targets:602   GUG-CACACCGGACAGUCCGGUGA   624 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0045K13 mRNA, complete cds	NA	coding protein	psRNATarget
BT068112.2	ncRNA:24   CACAGUG-UGACCUGUCAGGCCACG   1   |||-|||-||*|||||||||||||| targets:726   GUG-CACCACCGGACAGUCCGGUGC   749 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFb0045K13 mRNA, complete cds	NA	coding protein	psRNATarget
BT065201.2	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |||-|||||*|||||||||||||| targets:744   GUG-CACACCGGACAGUCCGGUGC   766 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0032D05 mRNA, complete cds	NA	coding protein	psRNATarget
BT065201.2	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   *||||*|||*|||||||||||||| targets:815   UUGUCCCACCGGACAGUCCGGUGC   838 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0032D05 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001165868.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |||-|||||*|||||||||||||| targets:841   GUG-CACACCGGACAGUCCGGUGC   863 Target Full Sequence	1.0	Zea mays uncharacterized LOC100304434 (LOC100304434), mRNA	NA	coding protein	psRNATarget
NM_001165868.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |||-|||||*|||||||||||||= targets:624   GUG-CACACCGGACAGUCCGGUGU   646 Target Full Sequence	2.0	Zea mays uncharacterized LOC100304434 (LOC100304434), mRNA	NA	coding protein	psRNATarget
NM_001165868.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |||-|||||*|||||||||||||* targets:738   GUG-CACACCGGACAGUCCGGUGA   760 Target Full Sequence	2.0	Zea mays uncharacterized LOC100304434 (LOC100304434), mRNA	NA	coding protein	psRNATarget
NM_001165868.1	ncRNA:24   CA--CAGUGUGACCUGUCAGGCCACG   1   ||--|*|=|||*|||||||||||||| targets:495   GUCGGGCGCACCGGACAGUCCGGUGC   520 Target Full Sequence	2.0	Zea mays uncharacterized LOC100304434 (LOC100304434), mRNA	NA	coding protein	psRNATarget
BT061141.2	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |||-|||||*|||||||||||||| targets:841   GUG-CACACCGGACAGUCCGGUGC   863 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0115B09 mRNA, complete cds	NA	coding protein	psRNATarget
BT061141.2	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |||-|||||*|||||||||||||= targets:624   GUG-CACACCGGACAGUCCGGUGU   646 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0115B09 mRNA, complete cds	NA	coding protein	psRNATarget
BT061141.2	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |||-|||||*|||||||||||||* targets:738   GUG-CACACCGGACAGUCCGGUGA   760 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0115B09 mRNA, complete cds	NA	coding protein	psRNATarget
BT061141.2	ncRNA:24   CA--CAGUGUGACCUGUCAGGCCACG   1   ||--|*|=|||*|||||||||||||| targets:495   GUCGGGCGCACCGGACAGUCCGGUGC   520 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0115B09 mRNA, complete cds	NA	coding protein	psRNATarget
BT019242.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |||*|=||||||||*||||||||| targets:952   GUGGCGCACUGGACUGUCCGGUGC   975 Target Full Sequence	2.5	Zea mays clone Contig915.F mRNA sequence	NA	coding protein	psRNATarget
NM_001175715.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |||*|=|||*|||||||||||||| targets:491   GUGGCGCACCGGACAGUCCGGUGC   514 Target Full Sequence	2.0	Zea mays uncharacterized LOC100383038 (LOC100383038), mRNA	NA	coding protein	psRNATarget
NM_001175715.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   *||*|=|||*|||||||||||||= targets:780   CUGGCGCACCGGACAGUCCGGUGU   803 Target Full Sequence	3.0	Zea mays uncharacterized LOC100383038 (LOC100383038), mRNA	NA	coding protein	psRNATarget
BT066013.2	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |||*|=|||*|||||||||||||| targets:491   GUGGCGCACCGGACAGUCCGGUGC   514 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0155M15 mRNA, complete cds	NA	coding protein	psRNATarget
BT066013.2	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   *||*|=|||*|||||||||||||= targets:780   CUGGCGCACCGGACAGUCCGGUGU   803 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFb0155M15 mRNA, complete cds	NA	coding protein	psRNATarget
EU952168.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |||*|=||||||||*||||||||| targets:481   GUGGCGCACUGGACUGUCCGGUGC   504 Target Full Sequence	2.5	Zea mays clone 1215356 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
EU952168.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |||-|||||||||||*|||||||| targets:1888   GUG-CACACUGGACAAUCCGGUGC   1910 Target Full Sequence	1.5	Zea mays clone 1215356 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
BT066811.2	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |||-|||||*|||||||||||||| targets:601   GUG-CACACCGGACAGUCCGGUGC   623 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0073A15 mRNA, complete cds	NA	coding protein	psRNATarget
BT066811.2	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |||-|||||*|||||||||||||* targets:699   GUG-CACACCGGACAGUCCGGUGA   721 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0073A15 mRNA, complete cds	NA	coding protein	psRNATarget
BT066811.2	ncRNA:24   CACAGUG-UGACCUGUCAGGCCACG   1   |||-|||-||*|||||||||||||| targets:802   GUG-CACCACCGGACAGUCCGGUGC   825 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFb0073A15 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001175949.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |||-|||||*|||||||||||||| targets:601   GUG-CACACCGGACAGUCCGGUGC   623 Target Full Sequence	1.0	Zea mays uncharacterized LOC100383289 (LOC100383289), mRNA	NA	coding protein	psRNATarget
NM_001175949.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |||-|||||*|||||||||||||* targets:699   GUG-CACACCGGACAGUCCGGUGA   721 Target Full Sequence	2.0	Zea mays uncharacterized LOC100383289 (LOC100383289), mRNA	NA	coding protein	psRNATarget
NM_001175949.1	ncRNA:24   CACAGUG-UGACCUGUCAGGCCACG   1   |||-|||-||*|||||||||||||| targets:802   GUG-CACCACCGGACAGUCCGGUGC   825 Target Full Sequence	3.0	Zea mays uncharacterized LOC100383289 (LOC100383289), mRNA	NA	coding protein	psRNATarget
NM_001165861.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |||-|||||*|||||||||||||| targets:449   GUG-CACACCGGACAGUCCGGUGC   471 Target Full Sequence	1.0	Zea mays uncharacterized LOC100304427 (LOC100304427), mRNA	NA	coding protein	psRNATarget
NM_001165861.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |||-|||||*|||||||||||||* targets:563   GUG-CACACCGGACAGUCCGGUGA   585 Target Full Sequence	2.0	Zea mays uncharacterized LOC100304427 (LOC100304427), mRNA	NA	coding protein	psRNATarget
NM_001165861.1	ncRNA:24   CACAGUG-UGACCUGUCAGGCCACG   1   |||-|||-||*|||||||||||||| targets:665   GUG-CACCACCGGACAGUCCGGUGC   688 Target Full Sequence	3.0	Zea mays uncharacterized LOC100304427 (LOC100304427), mRNA	NA	coding protein	psRNATarget
NM_001165861.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   **|*|=|||*|||||||||||||| targets:332   CGGGCGCACCGGACAGUCCGGUGC   355 Target Full Sequence	2.0	Zea mays uncharacterized LOC100304427 (LOC100304427), mRNA	NA	coding protein	psRNATarget
BT061124.2	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |||-|||||*|||||||||||||| targets:449   GUG-CACACCGGACAGUCCGGUGC   471 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0108N24 mRNA, complete cds	NA	coding protein	psRNATarget
BT061124.2	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |||-|||||*|||||||||||||* targets:563   GUG-CACACCGGACAGUCCGGUGA   585 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0108N24 mRNA, complete cds	NA	coding protein	psRNATarget
BT061124.2	ncRNA:24   CACAGUG-UGACCUGUCAGGCCACG   1   |||-|||-||*|||||||||||||| targets:665   GUG-CACCACCGGACAGUCCGGUGC   688 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFb0108N24 mRNA, complete cds	NA	coding protein	psRNATarget
BT061124.2	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   **|*|=|||*|||||||||||||| targets:332   CGGGCGCACCGGACAGUCCGGUGC   355 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0108N24 mRNA, complete cds	NA	coding protein	psRNATarget
EU940831.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |||-|||||*|||||||||||||| targets:297   GUG-CACACCGGACAGUCCGGUGC   319 Target Full Sequence	1.0	Zea mays clone 1157596 mRNA sequence	NA	coding protein	psRNATarget
EU940831.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |||-|||||*|||||||||||||* targets:411   GUG-CACACCGGACAGUCCGGUGA   433 Target Full Sequence	2.0	Zea mays clone 1157596 mRNA sequence	NA	coding protein	psRNATarget
EU940831.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |||**=|||*|||||||||||||| targets:180   GUGGAGCACCGGACAGUCCGGUGC   203 Target Full Sequence	2.0	Zea mays clone 1157596 mRNA sequence	NA	coding protein	psRNATarget
XM_020546123.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |||-|||||*|||||||||||||| targets:4496   GUG-CACACCGGACAGUCCGGUGC   4518 Target Full Sequence	1.0	PREDICTED: Zea mays protein NUCLEAR FUSION DEFECTIVE 4-like (LOC103641819), mRNA	NA	coding protein	psRNATarget
XM_020546123.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   *||||*|||*|||||||||||||| targets:4591   UUGUCUCACCGGACAGUCCGGUGC   4614 Target Full Sequence	2.0	PREDICTED: Zea mays protein NUCLEAR FUSION DEFECTIVE 4-like (LOC103641819), mRNA	NA	coding protein	psRNATarget
XM_020546123.1	ncRNA:24   CACAGUG-UGACCUGUCAGGCCACG   1   |||-|||-||*|||||||||||||| targets:4713   GUG-CACCACCGGACAGUCCGGUGC   4736 Target Full Sequence	3.0	PREDICTED: Zea mays protein NUCLEAR FUSION DEFECTIVE 4-like (LOC103641819), mRNA	NA	coding protein	psRNATarget
HI410113.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |||*==|||*|||||||||||||| targets:149   GUGGUGCACCGGACAGUCCGGUGC   172 Target Full Sequence	2.0	Sequence 8238 from Patent EP2074227	NA	coding protein	psRNATarget
JB170574.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |||*==|||*|||||||||||||| targets:149   GUGGUGCACCGGACAGUCCGGUGC   172 Target Full Sequence	2.0	Sequence 8238 from Patent EP2559767	NA	coding protein	psRNATarget
LQ242243.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |||*==|||*|||||||||||||| targets:149   GUGGUGCACCGGACAGUCCGGUGC   172 Target Full Sequence	2.0	Sequence 8238 from Patent EP2985353	NA	coding protein	psRNATarget
EU950973.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   ||||-=|||*|||||||||||||| targets:184   GUGU-GCACCGGACAGUCCGGUGC   206 Target Full Sequence	2.0	Zea mays clone 677173 mRNA sequence	NA	coding protein	psRNATarget
BT018386.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |||-||||||||||*||||||||= targets:773   GUG-CACACUGGACUGUCCGGUGU   795 Target Full Sequence	2.5	Zea mays clone EL01N0313G04.d mRNA sequence	NA	coding protein	psRNATarget
JB170393.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |||*|*|||*|||||||||||||| targets:31   GUGGCCCACCGGACAGUCCGGUGC   54 Target Full Sequence	2.0	Sequence 8057 from Patent EP2559767	NA	coding protein	psRNATarget
LQ242062.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |||*|*|||*|||||||||||||| targets:31   GUGGCCCACCGGACAGUCCGGUGC   54 Target Full Sequence	2.0	Sequence 8057 from Patent EP2985353	NA	coding protein	psRNATarget
HI409932.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |||*|*|||*|||||||||||||| targets:31   GUGGCCCACCGGACAGUCCGGUGC   54 Target Full Sequence	2.0	Sequence 8057 from Patent EP2074227	NA	coding protein	psRNATarget
EZ065990.1	ncRNA:23   ACAGUGUGACCUGUCAGGCCACG   1   ||*|=|||*|||||||||||||| targets:1   UGGCGCACCGGACAGUCCGGUGC   23 Target Full Sequence	2.0	TSA: Zea mays contig01624, mRNA sequence	NA	coding protein	psRNATarget
EZ109126.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   *||*|=|||*|||||||||||||| targets:175   AUGGCGCACCGGACAGUCCGGUGC   198 Target Full Sequence	2.0	TSA: Zea mays contig44785, mRNA sequence	NA	coding protein	psRNATarget
HI409657.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |||*|||||*|||||*|||||||| targets:36   GUGGCACACCGGACAAUCCGGUGC   59 Target Full Sequence	2.5	Sequence 7782 from Patent EP2074227	NA	coding protein	psRNATarget
JB170118.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |||*|||||*|||||*|||||||| targets:36   GUGGCACACCGGACAAUCCGGUGC   59 Target Full Sequence	2.5	Sequence 7782 from Patent EP2559767	NA	coding protein	psRNATarget
LQ241787.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |||*|||||*|||||*|||||||| targets:36   GUGGCACACCGGACAAUCCGGUGC   59 Target Full Sequence	2.5	Sequence 7782 from Patent EP2985353	NA	coding protein	psRNATarget
NM_001175687.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   *||*|=|||*|||||||||||||| targets:505   CUGGCGCACCGGACAGUCCGGUGC   528 Target Full Sequence	2.0	Zea mays uncharacterized LOC100383005 (LOC100383005), mRNA	NA	coding protein	psRNATarget
NM_001175687.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   *||*|=|||*|||||||||||||| targets:601   UUGGCGCACCGGACAGUCCGGUGC   624 Target Full Sequence	2.0	Zea mays uncharacterized LOC100383005 (LOC100383005), mRNA	NA	coding protein	psRNATarget
NM_001175687.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |||-|||||*|||||||||||||* targets:716   GUG-CACACCGGACAGUCCGGUGA   738 Target Full Sequence	2.0	Zea mays uncharacterized LOC100383005 (LOC100383005), mRNA	NA	coding protein	psRNATarget
BT065921.2	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   *||*|=|||*|||||||||||||| targets:505   CUGGCGCACCGGACAGUCCGGUGC   528 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFc0044K19 mRNA, complete cds	NA	coding protein	psRNATarget
BT065921.2	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   *||*|=|||*|||||||||||||| targets:601   UUGGCGCACCGGACAGUCCGGUGC   624 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFc0044K19 mRNA, complete cds	NA	coding protein	psRNATarget
BT065921.2	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |||-|||||*|||||||||||||* targets:716   GUG-CACACCGGACAGUCCGGUGA   738 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFc0044K19 mRNA, complete cds	NA	coding protein	psRNATarget
HI409440.1	ncRNA:24   CACAGUG-UGACCUGUCAGGCCACG   1   |||-|||-||*|||||||||||||| targets:32   GUG-CACCACCGGACAGUCCGGUGC   55 Target Full Sequence	3.0	Sequence 7565 from Patent EP2074227	NA	coding protein	psRNATarget
JB169901.1	ncRNA:24   CACAGUG-UGACCUGUCAGGCCACG   1   |||-|||-||*|||||||||||||| targets:32   GUG-CACCACCGGACAGUCCGGUGC   55 Target Full Sequence	3.0	Sequence 7565 from Patent EP2559767	NA	coding protein	psRNATarget
LQ241570.1	ncRNA:24   CACAGUG-UGACCUGUCAGGCCACG   1   |||-|||-||*|||||||||||||| targets:32   GUG-CACCACCGGACAGUCCGGUGC   55 Target Full Sequence	3.0	Sequence 7565 from Patent EP2985353	NA	coding protein	psRNATarget
LQ241540.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   *||*|||||*|||||||||||||* targets:12   CUGGCACACCGGACAGUCCGGUGA   35 Target Full Sequence	2.0	Sequence 7535 from Patent EP2985353	NA	coding protein	psRNATarget
LQ241540.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   *||*==|||*|||||||||||||| targets:93   CUGGUGCACCGGACAGUCCGGUGC   116 Target Full Sequence	2.0	Sequence 7535 from Patent EP2985353	NA	coding protein	psRNATarget
HI409410.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   *||*|||||*|||||||||||||* targets:12   CUGGCACACCGGACAGUCCGGUGA   35 Target Full Sequence	2.0	Sequence 7535 from Patent EP2074227	NA	coding protein	psRNATarget
HI409410.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   *||*==|||*|||||||||||||| targets:93   CUGGUGCACCGGACAGUCCGGUGC   116 Target Full Sequence	2.0	Sequence 7535 from Patent EP2074227	NA	coding protein	psRNATarget
JB169871.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   *||*|||||*|||||||||||||* targets:12   CUGGCACACCGGACAGUCCGGUGA   35 Target Full Sequence	2.0	Sequence 7535 from Patent EP2559767	NA	coding protein	psRNATarget
JB169871.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   *||*==|||*|||||||||||||| targets:93   CUGGUGCACCGGACAGUCCGGUGC   116 Target Full Sequence	2.0	Sequence 7535 from Patent EP2559767	NA	coding protein	psRNATarget
BT064593.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   ||||**||||||||*||||||||| targets:779   GUGUGCCACUGGACUGUCCGGUGC   802 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0188B15 mRNA, complete cds	NA	coding protein	psRNATarget
BT063396.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   ||||**||||||||*||||||||| targets:2738   GUGUGCCACUGGACUGUCCGGUGC   2761 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0059P01 mRNA, complete cds	NA	coding protein	psRNATarget
HI409836.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |||-|||||*||||*||||||||| targets:37   GUG-CACACCGGACUGUCCGGUGC   59 Target Full Sequence	2.5	Sequence 7961 from Patent EP2074227	NA	coding protein	psRNATarget
JB170297.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |||-|||||*||||*||||||||| targets:37   GUG-CACACCGGACUGUCCGGUGC   59 Target Full Sequence	2.5	Sequence 7961 from Patent EP2559767	NA	coding protein	psRNATarget
LQ241966.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |||-|||||*||||*||||||||| targets:37   GUG-CACACCGGACUGUCCGGUGC   59 Target Full Sequence	2.5	Sequence 7961 from Patent EP2985353	NA	coding protein	psRNATarget
HI410005.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |||*|=|||**||||||||||||| targets:5   GUGGCGCACCAGACAGUCCGGUGC   28 Target Full Sequence	3.0	Sequence 8130 from Patent EP2074227	NA	coding protein	psRNATarget
LQ242135.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |||*|=|||**||||||||||||| targets:5   GUGGCGCACCAGACAGUCCGGUGC   28 Target Full Sequence	3.0	Sequence 8130 from Patent EP2985353	NA	coding protein	psRNATarget
JB170466.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |||*|=|||**||||||||||||| targets:5   GUGGCGCACCAGACAGUCCGGUGC   28 Target Full Sequence	3.0	Sequence 8130 from Patent EP2559767	NA	coding protein	psRNATarget
BT069074.2	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   *||*==|||*|||||||||||||| targets:763   CUGGUGCACCGGACAGUCCGGUGC   786 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0158J22 mRNA, complete cds	NA	coding protein	psRNATarget
BT069074.2	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |||*=*|||*|||||||||||||* targets:682   GUGCUUCACCGGACAGUCCGGUGA   705 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFb0158J22 mRNA, complete cds	NA	coding protein	psRNATarget
BT069634.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   ||||-||||*||||*||||||||| targets:722   GUGU-ACACCGGACUGUCCGGUGC   744 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0193J19 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001176828.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   ||||-||||*||||*||||||||| targets:722   GUGU-ACACCGGACUGUCCGGUGC   744 Target Full Sequence	2.5	Zea mays uncharacterized LOC100384263 (LOC100384263), mRNA	NA	coding protein	psRNATarget
BT066461.2	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |||*|=|||**||||||||||||| targets:485   GUGGCGCACCAGACAGUCCGGUGC   508 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFb0008E18 mRNA, complete cds	NA	coding protein	psRNATarget
BT066461.2	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |||-|||||*||*||||||||||| targets:613   GUG-CACACCGGUCAGUCCGGUGC   635 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0008E18 mRNA, complete cds	NA	coding protein	psRNATarget
BT066461.2	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   *||*|*|||*|||||||||||||| targets:707   UUGGCUCACCGGACAGUCCGGUGC   730 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0008E18 mRNA, complete cds	NA	coding protein	psRNATarget
U41079.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |||*|*|||*|||||||||||||* targets:26   GUGACUCACCGGACAGUCCGGUGA   49 Target Full Sequence	3.0	Zea mays copia-type retroelement PREM-2, partial sequence	NA	coding protein	psRNATarget
BT038885.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |**||*|||*|||||||||||||= targets:748   GCCUCUCACCGGACAGUCCGGUGU   771 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFb0337O17 mRNA, complete cds	NA	coding protein	psRNATarget
EU968231.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   |**||*|||*|||||||||||||= targets:1119   GCCUCUCACCGGACAGUCCGGUGU   1142 Target Full Sequence	3.0	Zea mays clone 317172 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
EZ101438.1	ncRNA:24   CACAGUGUGACCUGUCAGGCCACG   1   ****|=|||**||||||||||||| targets:38   UGCACGCACCAGACAGUCCGGUGC   61 Target Full Sequence	3.0	TSA: Zea mays contig37094, mRNA sequence	NA	coding protein	psRNATarget