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BaseInfo

ncRNA ID osa-miRf10476-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - GACGAAUCUCAGACAUCCAU - NA
Stem-loop(if miRNA)             C   C       A  CAC       UAAGU       UAACUCGUGGAUUCACUCAUGAG
UCGAGAAAUGGA GUC GAGAUUC UC   GUCACCA     UAAAAUU                       U
|||||||||||| ||| ||||||| ||   |||||||     |||||||                       U
AGCUUUUUACCU CAG CUCUAAG AG   CAGUGGU     CUCAAUU                       A
            A   A       C  AUA       ----A       CUAAAAUUGAGGGUUAUUUUAAA
Stem-loop sequence UCGAGAAAUGGACGUCCGAGAUUCAUCCACGUCACCAUAAGUUAAAAUUUAACUCGUGGAUUCACUCAUGAGUUAAAAUUUUAUUGGGAGUUAAAAUCUUAACUCAUGGUGACAUAGACGAAUCUCAGACAUCCAUUUUUCGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
CT837086.1
ncRNA:20   UACC-UACAGACUCUAAGCAG   1
  ||||-||||||||||||||||
targets:396   AUGGUAUGUCUGAGAUUCGUC   416

2.0 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA210N20, full insert sequence NA coding protein psRNATarget
AK069609.1
ncRNA:20   UACCUACAGACUCUAAGCAG   1
  ||*|||||||||||||=|||
targets:4067   AUAGAUGUCUGAGAUUUGUC   4086

2.5 Oryza sativa Japonica Group cDNA clone:J023020B12, full insert sequence NA coding protein psRNATarget
XM_015789578.1
ncRNA:20   UACCUACAGACUCUAAGCAG   1
  |||||*|||*||||||||||
targets:1806   AUGGACGUCCGAGAUUCGUC   1825

2.5 PREDICTED: Oryza sativa Japonica Group protein SRC2 (LOC9270916), mRNA protein SRC2(LOC9270916) coding protein psRNATarget