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BaseInfo

ncRNA ID	novel_zma_miR8787
Species	Zea mays
Class	miRNA
Genome position	Chr9:26601756-26601879 [+]
Reference genome	RefGen_v4
Source	SRR4237221;SRR4237223;SRR4237224;SRR5105963
Length	24
Mature sequence(if miRNA)	101 - ACAUGAGAUAGGAAUAACCGAACA - 124
Stem-loop(if miRNA)	--    UU   C     A       A     GA     -     UCGUUUCAAUCCAUAAUAA   UUCG  UUA UCUUA UUUAUGU GAUUG  UGAGA UUGAA                   G   ||||  ||| ||||| ||||||| |||||  ||||| |||||   AAGC  AAU AGGAU GAGUACA CUAAC  ACUCU AAUUU                   U AC    -C   A     A       C     UC     A     UUAAAAUACUUUCUAAAAU
Stem-loop sequence	UUCGUUUUACUCUUAAUUUAUGUAGAUUGGAUGAGAUUGAAUCGUUUCAAUCCAUAAUAAGUUAAAAUCUUUCAUAAAAUUUUUAAAUCUCACUCAAUCCACAUGAGAUAGGAAUAACCGAACA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AY111537.1	ncRNA:24   ACAAGCCAAUAAGGAUAGAGUACA   1   ||||=|||||||=||||||||||| targets:155   UGUUUGGUUAUUUCUAUCUCAUGU   178 Target Full Sequence	1.5	Zea mays CL7689_-2 mRNA sequence	NA	coding protein	psRNATarget
BT040160.1	ncRNA:24   ACAAGCCAAUAAGGAUAGAGUACA   1   ||||||||||||||||||*||||| targets:957   UGUUCGGUUAUUCCUAUCCCAUGU   980 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0068H20 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008660174.2	ncRNA:24   ACAAGCCAAUAAGGAUAGAGUACA   1   ||||=|||||||||||||*||||| targets:3510   UGUUUGGUUAUUCCUAUCCCAUGU   3533 Target Full Sequence	1.5	PREDICTED: Zea mays Protein CHAPERONE-LIKE PROTEIN OF POR1 chloroplastic (LOC100276880), transcript variant X2, mRNA	NA	coding protein	psRNATarget