ncRNA ID | novel_zma_miR8775 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr9:140324301-140324390 [+] |
Reference genome | RefGen_v4 |
Source | SRR4237221 |
Length | 24 |
Mature sequence(if miRNA) | 67 - AAACGGUACGGGUCGGGACGAGAA - 90 |
Stem-loop(if miRNA) |
AUC       U   U     ------   C      -U    UAAAUA  G    UCUCGUU CCG CCCGU      UUC AUAUUU  UCCG      CG A    ||||||| ||| |||||      ||| ||||||  ||||      ||    AGAGCAG GGC GGGCA      AAG UGUAAA  GGGC      GC A --A       -   U     UGGCAA   A      CU    ----UG  A |
Stem-loop sequence | AUCUCUCGUUUCCGUCCCGUUUCCAUAUUUUUCCGUAAAUACGGAAACGGUCGGGUCAAAUGUAGAAAACGGUACGGGUCGGGACGAGAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EU958510.1 |
|
1.5 | Zea mays clone 1697956 hypothetical protein mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
XM_008675371.2 |
|
2.5 | PREDICTED: Zea mays protein IQ-DOMAIN 14 (LOC103649639), mRNA | NA | coding protein | psRNATarget |