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BaseInfo

ncRNA ID novel_zma_miR8775
Species Zea mays
Class miRNA
Genome position Chr9:140324301-140324390 [+]
Reference genome RefGen_v4
Source SRR4237221
Length 24
Mature sequence(if miRNA) 67 - AAACGGUACGGGUCGGGACGAGAA - 90
Stem-loop(if miRNA) AUC       U   U     ------   C      -U    UAAAUA  G
   UCUCGUU CCG CCCGU      UUC AUAUUU  UCCG      CG A
   ||||||| ||| |||||      ||| ||||||  ||||      ||
   AGAGCAG GGC GGGCA      AAG UGUAAA  GGGC      GC A
--A       -   U     UGGCAA   A      CU    ----UG  A
Stem-loop sequence AUCUCUCGUUUCCGUCCCGUUUCCAUAUUUUUCCGUAAAUACGGAAACGGUCGGGUCAAAUGUAGAAAACGGUACGGGUCGGGACGAGAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU958510.1
ncRNA:24   AAGAGCAGGGCUGGGCAUGGCAAA   1
  *|||-||||||||||*||||||||
targets:377   CUCU-GUCCCGACCCAUACCGUUU   399

1.5 Zea mays clone 1697956 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
XM_008675371.2
ncRNA:24   AAGAGCAGGGCUGGGCAUGGCAAA   1
  *|=||*|||||*||||||||||||
targets:2354   AUUUCAUCCCGUCCCGUACCGUUU   2377

2.5 PREDICTED: Zea mays protein IQ-DOMAIN 14 (LOC103649639), mRNA NA coding protein psRNATarget