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BaseInfo

ncRNA ID	novel_zma_miR8764
Species	Zea mays
Class	miRNA
Genome position	Chr8:134429406-134429585 [-]
Reference genome	RefGen_v4
Source	SRR4237221
Length	22
Mature sequence(if miRNA)	159 - AUACUCCCUCCGUCUCAGGAUA - 180
Stem-loop(if miRNA)	--                 GG                     UA   UU UC   CAAUAUAAG    ---GCUC         A   -    A   AUACUCCCUCCGUCUCA  AUAUAAGGCGUAACCACUUUU  UUC  G  CCA         GCGU       UCUCUAUGC UAC GUAU U   |||||||||||||||||  |||||||||||||||||||||  |||  |  |||         ||||       ||||||||| ||| ||||   UAUGAGGGAGGCAGGGU  UAUAUUCCGCAUUGGUGGAGA  AAG  U  GGU         CGUA       AGAGAUAUG GUG CGUA C AA                 GA                     CC   UU CU   ---UCUUUA    AAUUAAC         -   A    G
Stem-loop sequence	AUACUCCCUCCGUCUCAGGAUAUAAGGCGUAACCACUUUUUAUUCUUGUCCCACAAUAUAAGGCGUGCUCUCUCUAUGCAUACGUAUAUCGAUGCAGUGGUAUAGAGACAAUUAAAUGCAUUUCUUGGUCUUUGAACCAGAGGUGGUUACGCCUUAUAUAGUGGGACGGAGGGAGUAUAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020546407.1	ncRNA:22   AUAGGACUCUGCCUCCCUCAUA   1   |||||||||||||||||||||* targets:933   UAUCCUGAGACGGAGGGAGUAG   954 Target Full Sequence	1.0	PREDICTED: Zea mays zinc finger BED domain-containing protein DAYSLEEPER-like (LOC109943429), mRNA	NA	coding protein	psRNATarget
EU974289.1	ncRNA:22   AUAGGACUCUGCCUCCCUCAUA   1   |||=|||=|||||||||||||* targets:348   UAUUCUGGGACGGAGGGAGUAC   369 Target Full Sequence	3.0	Zea mays clone 445101 mRNA sequence	NA	coding protein	psRNATarget
EU957638.1	ncRNA:22   AUAGGACUCUGCCUCCCUCAUA   1   |||*|||||||||||||||||* targets:2009   UAUACUGAGACGGAGGGAGUAA   2030 Target Full Sequence	2.0	Zea mays clone 1600726 cytochrome P450 CYP78A54 mRNA, complete cds	NA	coding protein	psRNATarget
BT084952.2	ncRNA:22   AUAGGACUCUGCCUCCCUCAUA   1   |||*=||=|||||||||||||| targets:36   UAUGUUGGGACGGAGGGAGUAU   57 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFb0213O06 mRNA, complete cds	NA	coding protein	psRNATarget
BT039461.1	ncRNA:22   AUAGGACUCUGCCUCCCUCAUA   1   |||*|||=|||||||||||||* targets:2077   UAUACUGGGACGGAGGGAGUAC   2098 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFc0014I07 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001147251.1	ncRNA:22   AUAGGACUCUGCCUCCCUCAUA   1   |||*|||=|||||||||||||* targets:2077   UAUACUGGGACGGAGGGAGUAC   2098 Target Full Sequence	3.0	Zea mays Regulator of Vps4 activity in the MVB pathway protein (LOC100272798), mRNA	NA	coding protein	psRNATarget