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BaseInfo

ncRNA ID novel_zma_miR8760
Species Zea mays
Class miRNA
Genome position Chr8:177494308-177494458 [-]
Reference genome RefGen_v4
Source SRR4237221;SRR4237224;SRR4237225
Length 21
Mature sequence(if miRNA) 131 - UUACACAAAUGAGGACUAAAC - 151
Stem-loop(if miRNA) --       A             A GA       CC               UUC     UUC   UAU   G  - U
  UUACACA AUGAGGACUAAAC A  AGGUAAA  UAUUAAGUCUAAUUA   CAUGA   GCA   GUG UG C A
  ||||||| ||||||||||||| |  |||||||  |||||||||||||||   |||||   |||   ||| || |
  AAUGUGU UAUUUCUGAUUUG U  UCUAUUU  AUAAUUCGGAUUAGU   GUAUU   CGU   UAU AC G C
UU       C             C AC       AA               UAA     CAU   --U   G  U A
Stem-loop sequence UUACACAAAUGAGGACUAAACAAGAAGGUAAACCUAUUAAGUCUAAUUAUUCCAUGAUUCGCAUAUGUGGUGCUACAGUCAGUAUUUGCUACUUAUGAAUUGAUUAGGCUUAAUAAAUUUAUCUCAUCGUUUAGUCUUUAUCUGUGUAAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AY112012.1
ncRNA:21   CAAAUCAGGAGUAAACACAUU   1
  **||*||=||||||||||||*
targets:311   CCUUCGUUCUCAUUUGUGUAC   331

3.0 Zea mays CL4197_1 mRNA sequence NA coding protein psRNATarget