ncRNA ID | novel_zma_miR8760 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr8:177494308-177494458 [-] |
Reference genome | RefGen_v4 |
Source | SRR4237221;SRR4237224;SRR4237225 |
Length | 21 |
Mature sequence(if miRNA) | 131 - UUACACAAAUGAGGACUAAAC - 151 |
Stem-loop(if miRNA) |
--       A             A GA       CC               UUC     UUC   UAU   G  - U   UUACACA AUGAGGACUAAAC A  AGGUAAA  UAUUAAGUCUAAUUA   CAUGA   GCA   GUG UG C A   ||||||| ||||||||||||| |  |||||||  |||||||||||||||   |||||   |||   ||| || |   AAUGUGU UAUUUCUGAUUUG U  UCUAUUU  AUAAUUCGGAUUAGU   GUAUU   CGU   UAU AC G C UU       C             C AC       AA               UAA     CAU   --U   G  U A |
Stem-loop sequence | UUACACAAAUGAGGACUAAACAAGAAGGUAAACCUAUUAAGUCUAAUUAUUCCAUGAUUCGCAUAUGUGGUGCUACAGUCAGUAUUUGCUACUUAUGAAUUGAUUAGGCUUAAUAAAUUUAUCUCAUCGUUUAGUCUUUAUCUGUGUAAUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AY112012.1 |
|
3.0 | Zea mays CL4197_1 mRNA sequence | NA | coding protein | psRNATarget |