Search result

BaseInfo

ncRNA ID	novel_zma_miR8742
Species	Zea mays
Class	miRNA
Genome position	Chr7:28700362-28700442 [+]
Reference genome	RefGen_v4
Source	SRR4237221
Length	24
Mature sequence(if miRNA)	1 - AGUGCUGCACUCGGCAAAGGGGUC - 24
Stem-loop(if miRNA)	--     U     C    A   G UCG   C    U       AGUGC GCACU GGCA AGG G   CCU UGCC AGUGC   ||||| ||||| |||| ||| |   ||| |||| ||||U   UCACG CGUGA CCGU UCC C   GGA ACGG UCACG GC     U     U    C   G UUA   C    C
Stem-loop sequence	AGUGCUGCACUCGGCAAAGGGGUCGCCUCUGCCUAGUGCUGCACUCGGCACAGGAUUCGCCUCUGCCUAGUGCUGCACUCG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB170493.1	ncRNA:24   CUGGGGAAACGGCUCACGUCGUGA   1   ||***|||||||||||||*||||| targets:8   GAAGGCUUUGCCGAGUGCCGCACU   31 Target Full Sequence	1.5	Sequence 8157 from Patent EP2559767	NA	coding protein	psRNATarget
HI410032.1	ncRNA:24   CUGGGGAAACGGCUCACGUCGUGA   1   ||***|||||||||||||*||||| targets:8   GAAGGCUUUGCCGAGUGCCGCACU   31 Target Full Sequence	1.5	Sequence 8157 from Patent EP2074227	NA	coding protein	psRNATarget
LQ242162.1	ncRNA:24   CUGGGGAAACGGCUCACGUCGUGA   1   ||***|||||||||||||*||||| targets:8   GAAGGCUUUGCCGAGUGCCGCACU   31 Target Full Sequence	1.5	Sequence 8157 from Patent EP2985353	NA	coding protein	psRNATarget
EZ101998.1	ncRNA:19   GAAACGGCUCACGUCGUGA   1   |||||=||||||||*|||| targets:1   CUUUGUCGAGUGCAACACU   19 Target Full Sequence	2.5	TSA: Zea mays contig37654, mRNA sequence	NA	coding protein	psRNATarget