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BaseInfo

ncRNA ID	novel_zma_miR8737
Species	Zea mays
Class	miRNA
Genome position	Chr7:125227994-125228120 [-]
Reference genome	RefGen_v4
Source	SRR4237221;SRR5100248;SRR5100255;SRR5451003
Length	24
Mature sequence(if miRNA)	1 - AACCAGAGACGUUAGAUCUAAGAU - 24
Stem-loop(if miRNA)	--  C     A  UA      C      GU             U    CCUUCCACUACUACACUC    AC   CU AGAUC AA  UCUUUG UUGUUC  UAUAUUUUGUAAA AACA                  UAUC  U   || ||||| ||  |||||| ||||||  ||||||||||||| ||||                  ||||   GA UCUAG UU  AGAGAC AACGAG  AUAUAAAAUGUUU UUGU                  AUAG  U UA  A     A  GC      C      AU             C    -----------------A    AC
Stem-loop sequence	CUCAGAUCAAAUAUCUUUGCUUGUUCGUUAUAUUUUGUAAAUAACACCUUCCACUACUACACUCUAUCACUUCAGAUAAUGUUCUUUGUAAAAUAUAUAGAGCAACCAGAGACGUUAGAUCUAAGAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ235354.1	ncRNA:24   UAGAAUCUAGAUUGCAGAGACCAA   1   ||=|||||||||||||||||*||| targets:20   AUUUUAGAUCUAACGUCUCUAGUU   43 Target Full Sequence	1.5	Sequence 1349 from Patent EP2985353	NA	coding protein	psRNATarget
HI403224.1	ncRNA:24   UAGAAUCUAGAUUGCAGAGACCAA   1   ||=|||||||||||||||||*||| targets:20   AUUUUAGAUCUAACGUCUCUAGUU   43 Target Full Sequence	1.5	Sequence 1349 from Patent EP2074227	NA	coding protein	psRNATarget
JB163685.1	ncRNA:24   UAGAAUCUAGAUUGCAGAGACCAA   1   ||=|||||||||||||||||*||| targets:20   AUUUUAGAUCUAACGUCUCUAGUU   43 Target Full Sequence	1.5	Sequence 1349 from Patent EP2559767	NA	coding protein	psRNATarget
BT087210.1	ncRNA:24   UAGAAUCUAGAUUGCAGAGACCAA   1   ||=|||||||||||||||||*||| targets:346   AUUUUAGAUCUAACGUCUCUAGUU   369 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0076O09 mRNA, complete cds	NA	coding protein	psRNATarget
HI405990.1	ncRNA:24   UAGAAUCUAGAUUGCAGAGACCAA   1   ||=||||||=||||||||||*||| targets:38   AUUUUAGAUUUAACGUCUCUAGUU   61 Target Full Sequence	2.5	Sequence 4115 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238120.1	ncRNA:24   UAGAAUCUAGAUUGCAGAGACCAA   1   ||=||||||=||||||||||*||| targets:38   AUUUUAGAUUUAACGUCUCUAGUU   61 Target Full Sequence	2.5	Sequence 4115 from Patent EP2985353	NA	coding protein	psRNATarget
JB166451.1	ncRNA:24   UAGAAUCUAGAUUGCAGAGACCAA   1   ||=||||||=||||||||||*||| targets:38   AUUUUAGAUUUAACGUCUCUAGUU   61 Target Full Sequence	2.5	Sequence 4115 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235128.1	ncRNA:24   UAGAAUCUAGAUUGCAGAGACCAA   1   ||=||||||=||||||||||*||| targets:72   AUUUUAGAUUUAACGUCUCUAGUU   95 Target Full Sequence	2.5	Sequence 1123 from Patent EP2985353	NA	coding protein	psRNATarget
JB163459.1	ncRNA:24   UAGAAUCUAGAUUGCAGAGACCAA   1   ||=||||||=||||||||||*||| targets:72   AUUUUAGAUUUAACGUCUCUAGUU   95 Target Full Sequence	2.5	Sequence 1123 from Patent EP2559767	NA	coding protein	psRNATarget
HI402998.1	ncRNA:24   UAGAAUCUAGAUUGCAGAGACCAA   1   ||=||||||=||||||||||*||| targets:72   AUUUUAGAUUUAACGUCUCUAGUU   95 Target Full Sequence	2.5	Sequence 1123 from Patent EP2074227	NA	coding protein	psRNATarget
BT061436.2	ncRNA:24   UAGAAUCUAGAUUGCAGAGACCAA   1   ||=||||||=||||||||||*||| targets:180   AUUUUAGAUUUAACGUCUCUAGUU   203 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0145O04 mRNA, complete cds	NA	coding protein	psRNATarget