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BaseInfo

ncRNA ID	novel_zma_miR8734
Species	Zea mays
Class	miRNA
Genome position	Chr7:154483036-154483133 [-]
Reference genome	RefGen_v4
Source	SRR4237221;SRR4237227
Length	24
Mature sequence(if miRNA)	1 - AUUGUGGCACCUUAGGUAGGAAAC - 24
Stem-loop(if miRNA)	--UAG          C       CA  C    -   UUUUUUGCCUAA     AU      CUGCCUAAGG GCCACAA  UG CUAA CUU            GGUCA  A      |||||||||| |||||||  || |||| |||            |||||  U      GAUGGAUUCC CGGUGUU  AC GAUU GAA            UCAGU  G CAAAG          A       AG  A    C   ------------     GA
Stem-loop sequence	UAGCUGCCUAAGGCGCCACAACAUGCCUAACUUUUUUUUGCCUAAGGUCAAUAUGAGUGACUAAGCUUAGACAGAUUGUGGCACCUUAGGUAGGAAAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020547797.1	ncRNA:24   CAAAGGAUGGAUUCCACGGUGUUA   1   ||||||||||||||||||=||||| targets:2034   GUUUCCUACCUAAGGUGCUACAAU   2057 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC100285478 (LOC100285478), transcript variant X1, mRNA	NA	coding protein	psRNATarget
LQ235151.1	ncRNA:24   CAAAGGAUGGAUUCCACGGUGUUA   1   |||||||=|||||||*|||||||| targets:9   GUUUCCUGCCUAAGGCGCCACAAU   32 Target Full Sequence	2.5	Sequence 1146 from Patent EP2985353	NA	coding protein	psRNATarget
JB163482.1	ncRNA:24   CAAAGGAUGGAUUCCACGGUGUUA   1   |||||||=|||||||*|||||||| targets:9   GUUUCCUGCCUAAGGCGCCACAAU   32 Target Full Sequence	2.5	Sequence 1146 from Patent EP2559767	NA	coding protein	psRNATarget
HI403021.1	ncRNA:24   CAAAGGAUGGAUUCCACGGUGUUA   1   |||||||=|||||||*|||||||| targets:9   GUUUCCUGCCUAAGGCGCCACAAU   32 Target Full Sequence	2.5	Sequence 1146 from Patent EP2074227	NA	coding protein	psRNATarget
XM_008673397.2	ncRNA:24   CAAAGGAUGGAUUCCACGGUGUUA   1   ||||||||*||||||*|||||||| targets:16   GUUUCCUAGCUAAGGCGCCACAAU   39 Target Full Sequence	2.5	PREDICTED: Zea mays adenylate isopentenyltransferase 5, chloroplastic (LOC103649047), mRNA	NA	coding protein	psRNATarget