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BaseInfo

ncRNA ID novel_zma_miR8732
Species Zea mays
Class miRNA
Genome position Chr7:175900330-175900428 [-]
Reference genome RefGen_v4
Source SRR4237221;SRR4237227
Length 24
Mature sequence(if miRNA) 1 - AUGUUAACUCCGUAGCAACGCACG - 24
Stem-loop(if miRNA) --UA                          UAAU    -   --A    UU
    CGUUGCUACGGAGUUAACAUAUAAUG    GAUA AUU   AUGU  C
    ||||||||||||||||||||||||||    |||| |||   ||||
    GCAACGAUGCCUCAAUUGUAUAUUAC    CUAU UAA   UACA  U
GCAC                          UAUU    A   CUC    UA
Stem-loop sequence UACGUUGCUACGGAGUUAACAUAUAAUGUAAUGAUAAUUAAUGUUUCUAUACAUCUCAAUAUAUCUUAUCAUUAUAUGUUAACUCCGUAGCAACGCACG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ106575.1
ncRNA:24   GCACGCAACGAUGCCUCAAUUGUA   1
  ||||||||||||||||||*|||||
targets:86   CGUGCGUUGCUACGGAGUCAACAU   109

1.5 TSA: Zea mays contig42233, mRNA sequence NA coding protein psRNATarget
EU940751.1
ncRNA:24   GCACGCAACGAUGCCUCAAUUGUA   1
  ||||||||||||||||||*|||||
targets:383   CGUGCGUUGCUACGGAGUGAACAU   406

1.5 Zea mays clone 1061917 mRNA sequence NA coding protein psRNATarget
EU947159.1
ncRNA:24   GCACGCAACGAUGCCUCAAUUGUA   1
  |||||*||||||||||||*|||||
targets:587   CGUGCUUUGCUACGGAGUCAACAU   610

2.5 Zea mays clone 330083 mRNA sequence NA coding protein psRNATarget