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BaseInfo

ncRNA ID	novel_zma_miR8727
Species	Zea mays
Class	miRNA
Genome position	Chr7:163682458-163682527 [+]
Reference genome	RefGen_v4
Source	SRR4237221
Length	24
Mature sequence(if miRNA)	1 - AGUACUCGGCAAAGAACCAUUUGC - 24
Stem-loop(if miRNA)	--AG             A      ---  -  A   UU     UACUCGGCAAAGA CCAUUU   GC CG GUA  U     ||||||||||||| ||||||   || || |||     GUGAGCCGUUUUU GGUAAA   UG GC CGU  C CAGA             -      AUG  A  -   UU
Stem-loop sequence	AGUACUCGGCAAAGAACCAUUUGCCGAGUAUUUCUUUGCCGAGUGUAAAAUGGUUUUUGCCGAGUGAGAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008645204.2	ncRNA:24   CGUUUACCAAGAAACGGCUCAUGA   1   ||||||*||||||||||*|||||| targets:3198   GCAAAUAGUUCUUUGCCAAGUACU   3221 Target Full Sequence	2.5	PREDICTED: Zea mays putative protein of unknown function (DUF640) domain family protein (LOC100278742), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020553261.1	ncRNA:24   CGUUUACCAAGAAACGGCUCAUGA   1   ||||||*||||||||||*|||||| targets:3205   GCAAAUAGUUCUUUGCCAAGUACU   3228 Target Full Sequence	2.5	PREDICTED: Zea mays putative protein of unknown function (DUF640) domain family protein (LOC100278742), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008645203.2	ncRNA:24   CGUUUACCAAGAAACGGCUCAUGA   1   ||||||*||||||||||*|||||| targets:3266   GCAAAUAGUUCUUUGCCAAGUACU   3289 Target Full Sequence	2.5	PREDICTED: Zea mays putative protein of unknown function (DUF640) domain family protein (LOC100278742), transcript variant X1, mRNA	NA	coding protein	psRNATarget
LQ239097.1	ncRNA:24   CGUUUACCAAGAAACGGCUCAUGA   1   |||||**|*||||||||||||||| targets:47   GCAAAGCGCUCUUUGCCGAGUACU   70 Target Full Sequence	3.0	Sequence 5092 from Patent EP2985353	NA	coding protein	psRNATarget
HI406967.1	ncRNA:24   CGUUUACCAAGAAACGGCUCAUGA   1   |||||**|*||||||||||||||| targets:47   GCAAAGCGCUCUUUGCCGAGUACU   70 Target Full Sequence	3.0	Sequence 5092 from Patent EP2074227	NA	coding protein	psRNATarget
JB167428.1	ncRNA:24   CGUUUACCAAGAAACGGCUCAUGA   1   |||||**|*||||||||||||||| targets:47   GCAAAGCGCUCUUUGCCGAGUACU   70 Target Full Sequence	3.0	Sequence 5092 from Patent EP2559767	NA	coding protein	psRNATarget
EU974507.1	ncRNA:24   CGUUUACCAAGAAACGGCUCAUGA   1   |=||**|*|||||||||||||||| targets:439   GUAACAGCUUCUUUGCCGAGUACU   462 Target Full Sequence	2.0	Zea mays clone 451014 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget