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BaseInfo

ncRNA ID novel_zma_miR8717
Species Zea mays
Class miRNA
Genome position Chr6:8558132-8558206 [+]
Reference genome RefGen_v4
Source SRR4237221;SRR4237224
Length 24
Mature sequence(if miRNA) 52 - AUUCCCUGUGUAAUGACUGUUAUA - 75
Stem-loop(if miRNA) ---UAG   UG G  U        GUGUU G  -U    G
      AGU  U AC GCGGGGGG     A AC  ACCC U
      |||  | || ||||||||     | ||  |||| C
      UCA  A UG UGUCCCUU     U UG  UGGG U
AUAUUG   GU A  -        ---AU G  UU    A
Stem-loop sequence UAGAGUUGUGACUGCGGGGGGGUGUUAGACUACCCGUCUAGGGUUUGUGUUAUUCCCUGUGUAAUGACUGUUAUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020546524.1
ncRNA:24   AUAUUGUCAGUAAUGUGUCCCUUA   1
  |||||==|*|||||||||||||||
targets:181   UAUAAUGGACAUUACACAGGGAAU   204

3.0 PREDICTED: Zea mays probable tetraacyldisaccharide 4'-kinase, mitochondrial (LOC109943461), mRNA NA coding protein psRNATarget