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BaseInfo

ncRNA ID	novel_zma_miR8715
Species	Zea mays
Class	miRNA
Genome position	Chr6:36317118-36317170 [-]
Reference genome	RefGen_v4
Source	SRR4237221
Length	22
Mature sequence(if miRNA)	1 - UCGGCACCAUAGGCUAUGGCGC - 22
Stem-loop(if miRNA)	--A             C       CA    UCGUAGCCUAUGG GCCGAGG  A    ||||||||||||| |||||||  U    GGUAUCGGAUACC CGGCUCU  A CGC             A       AC
Stem-loop sequence	AUCGUAGCCUAUGGCGCCGAGGCAAUACAUCUCGGCACCAUAGGCUAUGGCGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008654031.2	ncRNA:22   CGCGGUAUCGGAUACCACGGCU   1   |||||||=|||||||||||||| targets:1337   GCGCCAUGGCCUAUGGUGCCGA   1358 Target Full Sequence	1.0	PREDICTED: Zea mays peroxidase 2 (LOC103632211), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008666663.2	ncRNA:22   CGCGGUAUCGGAUACCACGGCU   1   ||||||||||||||||*||||| targets:870   GCGCCAUAGCCUAUGGCGCCGA   891 Target Full Sequence	1.5	PREDICTED: Zea mays hypothetical protein (LOC103643463), mRNA	NA	coding protein	psRNATarget
XM_020541199.1	ncRNA:22   CGCGGUAUCGGAUACCACGGCU   1   ||||||||||||||||*||||| targets:1310   GCGCCAUAGCCUAUGGCGCCGA   1331 Target Full Sequence	1.5	PREDICTED: Zea mays protein trichome birefringence-like 10 (LOC109940862), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020541198.1	ncRNA:22   CGCGGUAUCGGAUACCACGGCU   1   ||||||||||||||||*||||| targets:1308   GCGCCAUAGCCUAUGGCGCCGA   1329 Target Full Sequence	1.5	PREDICTED: Zea mays protein trichome birefringence-like 10 (LOC109940862), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008655193.2	ncRNA:22   CGCGGUAUCGGAUACCACGGCU   1   ||||||||||||||||*||||| targets:1367   GCGCCAUAGCCUAUGGCGCCGA   1388 Target Full Sequence	1.5	PREDICTED: Zea mays protein trichome birefringence-like 10 (LOC103633510), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008655192.2	ncRNA:22   CGCGGUAUCGGAUACCACGGCU   1   ||||||||||||||||*||||| targets:1367   GCGCCAUAGCCUAUGGCGCCGA   1388 Target Full Sequence	1.5	PREDICTED: Zea mays protein trichome birefringence-like 10 (LOC103633510), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008649330.2	ncRNA:22   CGCGGUAUCGGAUACCACGGCU   1   ||||||*|||||||||*||||| targets:13   GCGCCACAGCCUAUGGCGCCGA   34 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100273460 (LOC100273460), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008649328.2	ncRNA:22   CGCGGUAUCGGAUACCACGGCU   1   ||||||*|||||||||*||||| targets:11   GCGCCACAGCCUAUGGCGCCGA   32 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100273460 (LOC100273460), transcript variant X1, mRNA	NA	coding protein	psRNATarget