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BaseInfo

ncRNA ID novel_zma_miR8714
Species Zea mays
Class miRNA
Genome position Chr6:39525552-39525692 [-]
Reference genome RefGen_v4
Source SRR4237221
Length 19
Mature sequence(if miRNA) 1 - GUGACACCGGACUGUUCGG - 19
Stem-loop(if miRNA) --    U        G          ----   UCGGUGCGACACGCCGGACUAUCCGGUGUACCAGGGAAC
  GGAU GUCCGGUG CACACCGGAC    CGU                                       A
  |||| |||||||| ||||||||||    |||                                       G
  CUUG CAGGCCAC GUGUGGCCUG    GUG                                       U
GG    U        A          UAAG   CGGAGGAGGUAUCACGGUGGAUCUUGAUCGACAAACCGA
Stem-loop sequence GGAUUGUCCGGUGGCACACCGGACCGUUCGGUGCGACACGCCGGACUAUCCGGUGUACCAGGGAACAGUAGCCAAACAGCUAGUUCUAGGUGGCACUAUGGAGGAGGCGUGGAAUGUCCGGUGUGACACCGGACUGUUCGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT061709.2
ncRNA:19   GGCUUGUCAGGCCACAGUG   1
  |||=|||||*|||||||||
targets:704   CCGGACAGUACGGUGUCAC   722

2.5 Zea mays full-length cDNA clone ZM_BFb0176K17 mRNA, complete cds NA coding protein psRNATarget
NM_001174416.1
ncRNA:19   GGCUUGUCAGGCCACAGUG   1
  |||=|||||*|||||||||
targets:704   CCGGACAGUACGGUGUCAC   722

2.5 Zea mays uncharacterized LOC100381596 (LOC100381596), mRNA NA coding protein psRNATarget