Search result

BaseInfo

ncRNA ID	novel_zma_miR8710
Species	Zea mays
Class	miRNA
Genome position	Chr6:117030719-117030793 [-]
Reference genome	RefGen_v4
Source	SRR4237221
Length	24
Mature sequence(if miRNA)	52 - GAGAUGGGCGAGCCGAGCCGAGCU - 75
Stem-loop(if miRNA)	--         -   C         - U         G   GAGAUGGGC GAG CGAGCCGAG C UGGCUCGUU C   ||||||||| ||| ||||||||| | ||||||||| A   CUUUGCUCG CUC GCUCGGUUC G GUCGAGCGA U AC         G   A         C U         G
Stem-loop sequence	GAGAUGGGCGAGCCGAGCCGAGCUUGGCUCGUUGCAUGAGCGAGCUGUGCCUUGGCUCGACUCGGCUCGUUUCCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU976724.1	ncRNA:24   UCGAGCCGAGCCGAGCGGGUAGAG   1   ||||=|||||*||||||||||||* targets:517   AGCUUGGCUCAGCUCGCCCAUCUG   540 Target Full Sequence	2.0	Zea mays clone 988555 mRNA sequence	NA	coding protein	psRNATarget
BT087250.1	ncRNA:24   UCGAGCCGAGCCGAGCGGGUAGAG   1   *||-|||||||||||||||||||= targets:29   CGC-CGGCUCGGCUCGCCCAUCUU   51 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0017O20 mRNA, complete cds	NA	coding protein	psRNATarget
EU958825.1	ncRNA:24   UCGAGCCGAGCCGAGCGGGUAGAG   1   *||-|||||||||||||||||||= targets:31   CGC-CGGCUCGGCUCGCCCAUCUU   53 Target Full Sequence	1.0	Zea mays clone 207973 histone H3 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008680464.2	ncRNA:24   UCGAGCCGAGCCGAGCGGGUAGAG   1   *||-|||||||||||||||||||= targets:96   CGC-CGGCUCGGCUCGCCCAUCUU   118 Target Full Sequence	1.0	PREDICTED: Zea mays histone H3.2 (LOC103653610), mRNA	NA	coding protein	psRNATarget
EU947702.1	ncRNA:24   UCGAGCCGAGCCGAGCGGGUAGAG   1   *||-|||||||||||||||*|||| targets:38   CGC-CGGCUCGGCUCGCCCUUCUC   60 Target Full Sequence	1.5	Zea mays clone 353183 mRNA sequence	NA	coding protein	psRNATarget