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BaseInfo

ncRNA ID	novel_zma_miR8696
Species	Zea mays
Class	miRNA
Genome position	Chr5:148208513-148208590 [-]
Reference genome	RefGen_v4
Source	SRR4237221
Length	21
Mature sequence(if miRNA)	1 - CUCUUGUGUGCUUGCUGUAGA - 21
Stem-loop(if miRNA)	--A     U       C  C CC  UGU       -AG  U    GCAGU AGUACAC GG G  AG   GUUCUGG   GA U    ||||| ||||||| || |  ||   |||||||   ||    UGUCG UCGUGUG UC C  UC   CGAGACU   CU U AGA     U       U  U UU  ---       GUA  U
Stem-loop sequence	AGCAGUUAGUACACCGGCGCCAGUGUGUUCUGGAGGAUUUUUCAUGUCAGAGCCUUUCUCUUGUGUGCUUGCUGUAGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT085108.2	ncRNA:21   AGAUGUCGUUCGUGUGUUCUC   1   ||||||||||||||||||||| targets:109   UCUACAGCAAGCACACAAGAG   129 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0287P04 mRNA, complete cds	NA	coding protein	psRNATarget
BT086814.2	ncRNA:21   AGAUGUCGUUCGUGUGUUCUC   1   ||||||*|||||||||=|||| targets:126   UCUACAUCAAGCACACGAGAG   146 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0371F24 mRNA, complete cds	NA	coding protein	psRNATarget
BT083894.2	ncRNA:21   AGAUGUCGUUCGUGUGUUCUC   1   ||||||*|||||||||=|||| targets:126   UCUACAUCAAGCACACGAGAG   146 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0051O20 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008658379.2	ncRNA:21   AGAUGUCGUUCGUGUGUUCUC   1   *||||*|||*||||||||||| targets:163   GCUACUGCAUGCACACAAGAG   183 Target Full Sequence	2.5	PREDICTED: Zea mays transcription factor bHLH87 (LOC103636015), mRNA	NA	coding protein	psRNATarget