Search result

BaseInfo

ncRNA ID osa-miRf10465-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 24
Mature sequence(if miRNA) NA - GAUGUCGAGGUUGAGCUCUGCCUC - NA
Stem-loop(if miRNA)       A                   C  G CG      G -   AU      CCAGAUCUGUCUCGGGG
CCGGUG UGUCGAGGUUGAGCUCUGC UC U  UCGCCU C UCC  GCGUGC                 C
|||||| ||||||||||||||||||| || |  |||||| | |||  ||||||
GGCUAU ACGGCUCCGGCUCGAGGCG AG A  GGUGGA G AGG  GCGACC                 A
      C                   C  G -A      G C   AG      AGCGGUCGUGUGCCGCG
Stem-loop sequence CCGGUGAUGUCGAGGUUGAGCUCUGCCUCGUCGUCGCCUGCUCCAUGCGUGCCCAGAUCUGUCUCGGGGCAGCGCCGUGUGCUGGCGACCAGCGGAGGACGGAGGUGGAAGGACGCGGAGCUCGGCCUCGGCACUAUCGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015762820.1
ncRNA:24   CUCCGUCUCGAGUUGGAGCUGUAG   1
  |*|||=|*|||||||||||||||*
targets:1017   GUGGCGGUGCUCAACCUCGACAUG   1040

3.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4352864 (LOC4352864), transcript variant X1, mRNA uncharacterized LOC4352864(LOC4352864) coding protein psRNATarget
AK241940.1
ncRNA:24   CUCCGUCUCGAGUUGGAGCUGUAG   1
  |*|||=|*|||||||||||||||*
targets:985   GUGGCGGUGCUCAACCUCGACAUG   1008

3.0 Oryza sativa Japonica Group cDNA, clone: J075087C06, full insert sequence NA coding protein psRNATarget
CT835571.1
ncRNA:24   CUCCGUCUCGAGUUGGAGCUGUAG   1
  |*|||=|*|||||||||||||||*
targets:979   GUGGCGGUGCUCAACCUCGACAUG   1002

3.0 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA129O06, full insert sequence NA coding protein psRNATarget