ncRNA ID | osa-miRf10465-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 24 |
Mature sequence(if miRNA) | NA - GAUGUCGAGGUUGAGCUCUGCCUC - NA |
Stem-loop(if miRNA) |
      A                   C  G CG      G -   AU      CCAGAUCUGUCUCGGGG CCGGUG UGUCGAGGUUGAGCUCUGC UC U  UCGCCU C UCC  GCGUGC                 C |||||| ||||||||||||||||||| || |  |||||| | |||  |||||| GGCUAU ACGGCUCCGGCUCGAGGCG AG A  GGUGGA G AGG  GCGACC                 A       C                   C  G -A      G C   AG      AGCGGUCGUGUGCCGCG |
Stem-loop sequence | CCGGUGAUGUCGAGGUUGAGCUCUGCCUCGUCGUCGCCUGCUCCAUGCGUGCCCAGAUCUGUCUCGGGGCAGCGCCGUGUGCUGGCGACCAGCGGAGGACGGAGGUGGAAGGACGCGGAGCUCGGCCUCGGCACUAUCGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015762820.1 |
|
3.0 | PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4352864 (LOC4352864), transcript variant X1, mRNA | uncharacterized LOC4352864(LOC4352864) | coding protein | psRNATarget | |||||||||
AK241940.1 |
|
3.0 | Oryza sativa Japonica Group cDNA, clone: J075087C06, full insert sequence | NA | coding protein | psRNATarget | |||||||||
CT835571.1 |
|
3.0 | Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA129O06, full insert sequence | NA | coding protein | psRNATarget |