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BaseInfo

ncRNA ID novel_zma_miR8673
Species Zea mays
Class miRNA
Genome position Chr5:158820200-158820272 [+]
Reference genome RefGen_v4
Source SRR4237221
Length 24
Mature sequence(if miRNA) 1 - GCCGAGUGCUGUCGGGCAGACACU - 24
Stem-loop(if miRNA) --        -     G     A    C        A
  GCCGAGUG CUGUC GGCAG CACU GGCAAAGA U
  |||||||| ||||| ||||| |||| |||||||| G
  CGGCUCAC GACGG CUGUC GUGA CCGUUUCU A
AA        A     G     -    A        U
Stem-loop sequence GCCGAGUGCUGUCGGGCAGACACUCGGCAAAGAAUGAUUCUUUGCCAAGUGCUGUCGGGCAGACACUCGGCAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB167100.1
ncRNA:24   UCACAGACGGGCUGUCGUGAGCCG   1
  ||||||*|||=|||||||||||||
targets:71   AGUGUCAGCCUGACAGCACUCGGC   94

2.0 Sequence 4764 from Patent EP2559767 NA coding protein psRNATarget
HI406639.1
ncRNA:24   UCACAGACGGGCUGUCGUGAGCCG   1
  ||||||*|||=|||||||||||||
targets:71   AGUGUCAGCCUGACAGCACUCGGC   94

2.0 Sequence 4764 from Patent EP2074227 NA coding protein psRNATarget
LQ238769.1
ncRNA:24   UCACAGACGGGCUGUCGUGAGCCG   1
  ||||||*|||=|||||||||||||
targets:71   AGUGUCAGCCUGACAGCACUCGGC   94

2.0 Sequence 4764 from Patent EP2985353 NA coding protein psRNATarget